Pairwise Alignments

Query, 351 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

Subject, 622 a.a., diguanylate cyclase (RefSeq) from Shewanella loihica PV-4

 Score =  122 bits (307), Expect = 2e-32
 Identities = 78/197 (39%), Positives = 122/197 (61%), Gaps = 12/197 (6%)

Query: 163 NKSLEAIIEERTRELSRVNHQLQIQLDENRRLAE---TDALTRVANRYRLEQALPLACER 219
           N+ LE +++ERT EL     +L    + N++L E    D+LT V NR   E+ L      
Sbjct: 421 NERLEQMVQERTLELEIALRELN---EANQKLTEQNTVDSLTGVKNRAAFEKRLQAEGRL 477

Query: 220 AQRFREPLSLIAMDVDDFKDINDRYGHAFGDAALVQVVQSVK-RCQRDGDLLVRWGGDEF 278
           ++R + PL+++ +D+D FK IND YGH  GD AL  + Q++K + +R  DL+ R+GG+EF
Sbjct: 478 SRRQQTPLAILMIDIDRFKAINDTYGHLAGDQALKTIAQALKEKLRRPSDLVSRFGGEEF 537

Query: 279 IMILPNTTLADARLLAESIRRGLSDL-LPVGD--FQITMSFGV-VQRLENEQHATLL-HR 333
            MILPNT+   A  +AE +R  +S+L L  G+    +T+S G+  + + ++QH  LL  +
Sbjct: 538 AMILPNTSCDGALQVAELMRSTVSELPLAWGEQAIPLTISIGICAEVIVDDQHTQLLVDQ 597

Query: 334 ADQALYRSKMSGKNVIC 350
           AD+ALYR+K  G+N +C
Sbjct: 598 ADKALYRAKHEGRNRVC 614