Pairwise Alignments

Query, 351 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Pseudomonas fluorescens FW300-N2E2

Subject, 355 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score =  136 bits (342), Expect = 9e-37
 Identities = 96/325 (29%), Positives = 161/325 (49%), Gaps = 44/325 (13%)

Query: 28  LSDLDEGVLHTILELVSDGIWDWNASTG-FVYRNPGWYTMLGYLPHSLDNNVLTWESVIH 86
           L+D  E  L   L+     +W+ +  +G     N  W  +LG+    L  +V +W+  +H
Sbjct: 57  LNDRAEEKLFAALDGNRLCLWEQHLPSGNLTIFNMRWGELLGFSREELAAHVDSWKQNLH 116

Query: 87  PDDYPRVMALFDDYLEQRSHGYQAEYRCRTRDGTYIWIEDRGYVIARNPDGTVARMIGAH 146
           P+D   V+  F+D++E +S  YQA +R   +DG+  W+ DRG ++ R PDGT  RM+G H
Sbjct: 117 PEDKEWVIKAFEDHVEGKSDYYQAVHRMIHKDGSVTWVSDRGRIVERKPDGTPLRMMGTH 176

Query: 147 RSIDDKKRLFEQLEQRNKSLEAIIEERTRELSRVNHQLQIQLDENRRLAETDALTRVANR 206
             I  +KR  ++L +                                LA  D LT ++NR
Sbjct: 177 MDITQEKRYEQELSE--------------------------------LAHCDPLTNLSNR 204

Query: 207 YRLEQALPLACERAQRFREPLSLIAMDVDDFKDINDRYGHAFGDAALVQVVQSVKRCQRD 266
               +A+ LA E   + R   S+  +D+D FK++ND+ GH FGD  LV V  +++     
Sbjct: 205 ----KAITLAFEELYQ-RGRGSIFFIDLDGFKELNDKLGHKFGDHLLVHVAHTLRGVIGT 259

Query: 267 GDLLVRWGGDEFIMILPN---TTLAD-ARLLAESIRRGLSDLLPVGDFQITMSFGVVQRL 322
              + R GGDEF+++ P+   T L++ A+ L +  R+ +  +L   + ++ +S G+    
Sbjct: 260 QAQIARLGGDEFLILHPSQDQTLLSERAQSLLDVYRQAI--ILEGTEVKLGLSIGIYCFT 317

Query: 323 ENEQHATLLHRADQALYRSKMSGKN 347
            ++  A+    AD A+YR K  GK+
Sbjct: 318 PSDDFASACEFADAAMYRVKAQGKH 342