Pairwise Alignments

Query, 304 a.a., Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 316 a.a., ubiquinol oxidase, subunit II (RefSeq) from Shewanella loihica PV-4

 Score =  340 bits (873), Expect = 2e-98
 Identities = 166/290 (57%), Positives = 213/290 (73%), Gaps = 11/290 (3%)

Query: 5   LGTLLLGGCNMTLLDPKGQVGLDERNLIITATLLMLLVVVPVIVMTFLFAWKYRATNTNA 64
           +  L+L GC   +LDPKGQVG+DE+ LI+ ATLLML+VV+PVIVMT  FAWKYR    + 
Sbjct: 13  MAALMLAGCEGGVLDPKGQVGIDEKQLIVIATLLMLIVVIPVIVMTLYFAWKYRDGRDHE 72

Query: 65  TYTPKWSHSTKIEVAVWTIPVLIIIALGYITYKSTHALDPYRPLDSDVKPITIEVVSMDW 124
            Y PKW+HS  IE+ VW +P++I+  LG IT+ STH LDPY+PL+ + +PI +EVVS++W
Sbjct: 73  IYAPKWAHSKTIELVVWCVPIVIVGILGVITWHSTHKLDPYQPLEHEAEPIIVEVVSLNW 132

Query: 125 KWLFIYPEQGIATVNKIVFPAHTPINFKVTSDTVMNSFFIPGLGGQIYAMAGMQTKLHLI 184
           KWLFIYPEQGIA+VN++ FPA+ P+NFK++SDT MNSFFIP LG QIY+MAGM TKLHLI
Sbjct: 133 KWLFIYPEQGIASVNELAFPANVPVNFKISSDTAMNSFFIPQLGSQIYSMAGMTTKLHLI 192

Query: 185 ANQNAELDGISANYSGAGFTGMKFKAIAT-TQEDFDAWVNDVKKAPKQLEKAEYEALSKP 243
           AN+     GISANYSGAGFTGMKF AIAT T++DF+AWV  VK+    L +  Y  L+K 
Sbjct: 193 ANEPGTYKGISANYSGAGFTGMKFNAIATPTRDDFNAWVAKVKREGAALGQESYRELAKE 252

Query: 244 SQNNPVELYSSVTPNLFQTIIDKY---------EGM-NPGKPMHHEKNEK 283
           S NNPV  Y+SV+  LF+ I+ +Y         EGM  P   +H + +E+
Sbjct: 253 SSNNPVSYYASVSDGLFEQIVMQYMHQHQMPAQEGMAMPAATLHGQSHEQ 302