Pairwise Alignments

Query, 304 a.a., Cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 342 a.a., ubiquinol oxidase, subunit II (RefSeq) from Shewanella sp. ANA-3

 Score =  362 bits (928), Expect = e-105
 Identities = 175/289 (60%), Positives = 218/289 (75%), Gaps = 4/289 (1%)

Query: 8   LLLGGCNMTLLDPKGQVGLDERNLIITATLLMLLVVVPVIVMTFLFAWKYRATNTNATYT 67
           L+L GC+  +LDPKGQ+G+DE++LII ATLLML+VV+PVI MT  FAWKYR    +  + 
Sbjct: 16  LMLAGCDGGVLDPKGQIGVDEKHLIIIATLLMLIVVIPVIFMTLFFAWKYRDGRDHEVFA 75

Query: 68  PKWSHSTKIEVAVWTIPVLIIIALGYITYKSTHALDPYRPLDSDVKPITIEVVSMDWKWL 127
           PKWSHS+ IE  VW +P++I++ LG IT+ STH LDPY+PL+ D KPIT+EVVSMDWKWL
Sbjct: 76  PKWSHSSAIETVVWIVPIVIVVILGVITWGSTHDLDPYKPLEHDAKPITVEVVSMDWKWL 135

Query: 128 FIYPEQGIATVNKIVFPAHTPINFKVTSDTVMNSFFIPGLGGQIYAMAGMQTKLHLIANQ 187
           FIYPEQG+A+VN++ FPA+ P+NFK+TSDT MNSFFIP LG QIY+MAGM TKLHLIAN+
Sbjct: 136 FIYPEQGVASVNELAFPANVPVNFKITSDTAMNSFFIPQLGSQIYSMAGMTTKLHLIANE 195

Query: 188 NAELDGISANYSGAGFTGMKFKAIAT-TQEDFDAWVNDVK-KAPKQLEKAEYEALSKPSQ 245
               DGISANYSGAGF GMKFKAIAT T  DFDAWV   K +A K L+ A Y+AL++ S+
Sbjct: 196 PGTYDGISANYSGAGFAGMKFKAIATPTAADFDAWVAKAKQQATKTLDSATYQALAQKSE 255

Query: 246 NNPVELYSSVTPNLFQTIIDKYEGMNPGKPM--HHEKNEKEVAHNMEGM 292
           NNPVE + SV+  +F  I+ +Y  M+  + M  H         HNM GM
Sbjct: 256 NNPVEYFGSVSHGMFDQIVMQYMHMDSNENMAGHEGMEHMSADHNMAGM 304