Pairwise Alignments

Query, 463 a.a., Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 452 a.a., transcriptional regulator, GntR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  170 bits (430), Expect = 1e-46
 Identities = 133/475 (28%), Positives = 208/475 (43%), Gaps = 41/475 (8%)

Query: 1   MWVPQLSEFSQPMYLSIADALARDINNGVLNEGDRLPTLRELATTLNVTPGTISRAYSEA 60
           +W+P L  F  P Y  +  A+ + I    L  G +LP  R LA  L VT GT++RAY+ A
Sbjct: 4   IWIPDLDVFVGPKYQRLVSAIEQGILQKELPHGTKLPPQRRLADALGVTIGTVTRAYALA 63

Query: 61  HRRRLVQGEVGRGTYVLNQKQLELPASNSAAAPLNLGQSELLDLSIIKPYSETLEYWLRG 120
            +R  V+  +G GTYV        P    A   LN+   +       +P ++ +   L  
Sbjct: 64  EQRGYVEARIGDGTYVNAS-----PVPEMANLQLNMATCQ-------QPLTDQIST-LSD 110

Query: 121 ALVGMAKS-TDFARALDYAPDGGHPAHREAGAQWLRHSLPDAQWQQVVITAGAQHGLMVA 179
            L  +AK  T  ++ L Y  +     H++    WL+    + Q +Q++ T G Q  +   
Sbjct: 111 CLSLLAKDPTKLSQLLGYRANP-LDQHQQTFHHWLKQRGIEQQSEQLIFTHGGQQAIFAC 169

Query: 180 MSALTNAGDLVLCEALCYPGIISLAHGLERRLRGVPMDDEGIIPEALRELCLREKPAMLV 239
           ++A    GD++L E  CYPGI   A  L     GVP+  EG+       L    +P ++ 
Sbjct: 170 LNAFLTKGDVLLHEQYCYPGIRICAKQLGINSIGVPLTSEGVDLVRFEALVQIHRPKLIY 229

Query: 240 CVATCQNPTAAIMSQKRRAQIAALAEEFDFIILDDDIYGFLATDPSIKPLSAFAP----D 295
                QNPT    S+++R Q+  LA+++ F I++DD+  +   +    PL   A      
Sbjct: 230 LTLNNQNPTCIQYSEQQRQQLLELAQQYQFYIIEDDV-NYCLPEEWHSPLWQLAQVLNIQ 288

Query: 296 RSVYLTSLSKSVMPALRVGYIYSPPKLLSRLTSMVRSSVWMPSPLTAQLASNVITEGLDK 355
           R +Y++SLSK     LR G+I  P  L++ L   + S  WM SPL  +LA  +I  G   
Sbjct: 289 RVIYISSLSKLFSGGLRQGFILVPEPLIAALRLAIHSQCWMVSPLNVELACQLIKRG--- 345

Query: 356 KLIRIQRNEAAGRQAIARE-------IFANFELKTQPYSYHVWLTLPEPWTSDEFTMLAR 408
                  +  A R AI RE       +     L  +    + W+ LPE   +        
Sbjct: 346 -------HITANRDAIIRERQQQCIALGQRLGLTQRWRGLNGWIQLPEDIKAHHLVTALA 398

Query: 409 ANGVLVLSGTQFQAERSGTTRCVRLVLMSPTSQDELRFALTKLASLIDSDPRRYY 463
           A GVL+  G  F          +RL L    +  + R A+  + S  ++  +  Y
Sbjct: 399 AKGVLIRHGDDFNCH----DNFIRLSLGGAENDTQFRLAIECIESTFNALKQNAY 449