Pairwise Alignments

Query, 455 a.a., FIG002188: hypothetical protein from Pseudomonas fluorescens FW300-N2E2

Subject, 454 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  442 bits (1138), Expect = e-129
 Identities = 223/457 (48%), Positives = 297/457 (64%), Gaps = 5/457 (1%)

Query: 1   MRKMILQCGALALSLLAANVMAAVSPDEANKLGTSLTPLGAEKAGNADGSIPAWTGGIPK 60
           M+K+ L   A+ ++L A    A VS  EA KLGT LTPLG EKAGNADGSIPAW GGI K
Sbjct: 1   MKKLTLLSAAVIVALTAPTAFAKVSEAEAAKLGTELTPLGGEKAGNADGSIPAWDGGITK 60

Query: 61  NAGAVDSKGFLADPFANEKPLFTITAATVDKYKDKLSEGQVAMFKRYPETYKIPVYPTHR 120
                +      DPF  +K  FTIT A   +YKD L+EGQ+ +F  YP+T+K+ VY T R
Sbjct: 61  PVAGYEKGMHHPDPFPGDKIEFTITNANKAQYKDNLTEGQLKLFDLYPDTFKMNVYQTRR 120

Query: 121 SVGLPPEIYESAKRSALNVNAINDGNGLANFTGNRYYAFPIPKSGVEVLWNHVTRYHGGN 180
           +  +P  +Y++ K +A     + DGNG++  +      FPIP++G+E +WNHV R+ G +
Sbjct: 121 TASVPQFVYDATKANASRAELVADGNGISGASIG--VPFPIPQNGLEAIWNHVLRFRGVD 178

Query: 181 LRRVITQVTPQTNGSFTPIRFEEEIAVPFLIKDA--DPEKASNVLTYFKQEVTAPARLAG 238
           +    +Q  P  +GS+T +   EEI   +   +   D  K SN L YFKQ VT PARLAG
Sbjct: 179 VETARSQAAPTASGSYTLVETAEEIRFEYSRPEMTLDKLKESNTLFYFKQVVTQPARLAG 238

Query: 239 NVLLVHETLDQVKEPRLAWIYNAGQRRVRRAPQVAYDGPGTAADGLRTSDNFDLFSGAPD 298
             LLV ET+DQ   PR AW YN GQRRVR+AP VA+D PGT +DGLRT+D+FD+F+G+P 
Sbjct: 239 TALLVKETMDQEALPRQAWTYNTGQRRVRKAPNVAFDTPGTVSDGLRTTDDFDMFNGSPV 298

Query: 299 RYDWKLVGKKEMYIPYNSYKLDSPSLKYDDVIKAGHINQDLTRYELHRVWEVVGTVKPSE 358
           RY+W+L+GKKE+YIPYN YKL S  LKY+ ++K GHIN D  R+E HRVW V   +K   
Sbjct: 299 RYNWELLGKKEIYIPYNDYKLHSDKLKYEQILKPGHINPDYVRWEKHRVWVVKAQLKEGM 358

Query: 359 RHIYAKRHMYIDEDSWQAALVDHYDGRGQLWRVAEGHAQFYYDHQNPGYTLEALYDIIAG 418
           RHIY  R  Y+DEDSWQ ++ D YD R +L+RVA  HA  YY+      TLE ++D+ + 
Sbjct: 359 RHIYKTRVFYLDEDSWQVSMADMYDNRDELYRVAVAHAINYYEVPTHWTTLEVIHDLQSR 418

Query: 419 RYIALGMKNEEKHSYEYGFEARAADYTPAALRSTGVR 455
           RY+A+G+ NE +  Y +  +   A++TPAALR  G+R
Sbjct: 419 RYLAMGLDNEGR-MYNFDAKLSEANFTPAALRRAGIR 454