Pairwise Alignments

Query, 671 a.a., Excinuclease ABC subunit B from Pseudomonas fluorescens FW300-N2E2

Subject, 673 a.a., excinuclease ABC subunit UvrB from Dyella japonica UNC79MFTsu3.2

 Score =  929 bits (2401), Expect = 0.0
 Identities = 470/671 (70%), Positives = 573/671 (85%), Gaps = 8/671 (1%)

Query: 4   FQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQIQRPTLVLA 63
           F+LV+ +QPAGDQP+AI  +V+G +AGLA QTLLGVTGSGKTF+IANVI Q+QRPT+V+A
Sbjct: 5   FELVSPYQPAGDQPQAIERLVKGFDAGLASQTLLGVTGSGKTFTIANVIQQVQRPTIVMA 64

Query: 64  PNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRL 123
            NKTLAAQLYGEFK FFP+NAVEYFVSYYDYYQPEAYV +SDTFIEKDASIN+HIEQMRL
Sbjct: 65  HNKTLAAQLYGEFKEFFPHNAVEYFVSYYDYYQPEAYVVASDTFIEKDASINEHIEQMRL 124

Query: 124 SATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYTRN 183
           +ATKALL RKD++IV TVS IYGLG PE YL + L + RG++++QRAL+R+L +LQYTRN
Sbjct: 125 AATKALLSRKDSLIVATVSAIYGLGDPEDYLSLRLILARGERIEQRALIRQLTELQYTRN 184

Query: 184 DMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRFTFY 243
           +++  R T+RVRG++ID++PAES+ EA+RIELFD EVE+LS FDPLTGE IRK+PR+T Y
Sbjct: 185 ELELRRGTYRVRGEIIDVFPAESETEALRIELFDGEVENLSLFDPLTGETIRKVPRYTVY 244

Query: 244 PKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELGYCN 303
           P++HY + RE++L+AIE IKVEL++RLEYL   NKLVEAQRL+QRTRFDLEM+ E+GYC 
Sbjct: 245 PRTHYASTRESVLNAIETIKVELKDRLEYLYKENKLVEAQRLDQRTRFDLEMMAEVGYCQ 304

Query: 304 GIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETLVEY 363
           GIENYSR+L+ R AG PPPTL+DYLPADALLV+DESHV++PQ+GAMYKGDRSRKE LVEY
Sbjct: 305 GIENYSRHLTRRGAGEPPPTLFDYLPADALLVVDESHVTIPQLGAMYKGDRSRKENLVEY 364

Query: 364 GFRLPSALDNRPMRFDEWESVSPQTIFVSATPGNYE-AEHAGRVVEQVVRPTGLVDPQVE 422
           GFRLPSA+DNRP+RF+EWE  +P+TI+VSATPG YE  +    VVE VVRPTGL+DP+VE
Sbjct: 365 GFRLPSAMDNRPLRFEEWERRAPRTIYVSATPGKYEMGKSDDSVVELVVRPTGLIDPEVE 424

Query: 423 VRPALTQVDDLLSEISKRVALEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDTVE 482
           VRP  TQVDDLL +I  RVA+ +RVLVTTLTKRMAE+LT+YL++H ++VRYLHSDI+TVE
Sbjct: 425 VRPVRTQVDDLLGQIRDRVAMGDRVLVTTLTKRMAENLTEYLSEHNIKVRYLHSDIETVE 484

Query: 483 RVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 542
           RVEIIRDLRLG FDVLVGINLLREGLDMPEVSLVAILDADKEGFLRS  SLIQTIGRAAR
Sbjct: 485 RVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSTGSLIQTIGRAAR 544

Query: 543 NLNGRAILYADRITGSMERAIGETERRRDKQIAFNLANGITPKGVFKDVADIMEGA--TV 600
           N+ G+AILYAD IT SM+ A+ ET RRR+KQ+A+N  +GI P+ V + +ADIMEGA   V
Sbjct: 545 NVRGKAILYADNITRSMQAAMDETARRREKQVAYNEEHGIVPQSVVRRIADIMEGARSAV 604

Query: 601 PGSRSKKRKG--MAKAAEESARYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQLR 658
           P +R +  +G   A  AE+ A Y+A   SP + +  I++LE +MY+ A +LEFE AA+LR
Sbjct: 605 P-TRGRGGRGAKAAAVAEQGADYKA--LSPDQASAMIKKLEAQMYKHAENLEFEDAARLR 661

Query: 659 DEIGKLRERLL 669
           D+I +LRE+ L
Sbjct: 662 DQIHQLREKAL 672