Pairwise Alignments

Query, 293 a.a., glutamyl-Q-tRNA synthetase from Pseudomonas fluorescens FW300-N2E2

Subject, 319 a.a., glutamate--tRNA ligase (RefSeq) from Shewanella loihica PV-4

 Score =  240 bits (613), Expect = 3e-68
 Identities = 134/282 (47%), Positives = 172/282 (60%), Gaps = 7/282 (2%)

Query: 4   YIGRFAPTPSGHLHFGSLVAALASYLDARAMGGRWLLRMEDLDPPREEPGAQAAILKALE 63
           Y+GRFAP+PSG LHFGSL+AAL SYL ARA  G+WL+R+ED+DPPRE  GA   ILK LE
Sbjct: 33  YVGRFAPSPSGPLHFGSLIAALGSYLRARAEQGQWLVRIEDIDPPREVKGASDLILKTLE 92

Query: 64  SYGFEWDGEMVRQSERHDAYDQVINRLFSQGLAYACTCSRKQLEAYQGIYPGLC--RNAG 121
           +YG  WDG ++ QS R D Y   +N L ++  AY C C+RKQ++A  G Y G C  R A 
Sbjct: 93  AYGLHWDGAVLYQSSRLDDYQARLNSLLAEDKAYYCQCTRKQIQAMGGTYDGRCAIRTAK 152

Query: 122 HGTEDAAIRLRVPELEYHFTDRVQGEFRQHLGREVGDFVIRRRDGLYAYQLAVVLDDAWQ 181
           H     AIR+R      HF D + G  R        DF+I+RRDGLYAYQLAVV+DDA+Q
Sbjct: 153 HTA--GAIRIRNTLAIDHFDDELLGPIRVEPEFAAEDFIIKRRDGLYAYQLAVVMDDAFQ 210

Query: 182 GVTDIVRGADLLDSTPRQLYLQELLGLPQPRYLHVPLITQPDGHKLGKSYRSPPLAADQA 241
           G+T++VRGADLL S+ RQ  L  L     P++LH+PL     G KL K   +P +     
Sbjct: 211 GITEVVRGADLLTSSARQATLFNLFDDNAPKWLHLPLACAEPGMKLSKQNHAPAIDLKAP 270

Query: 242 TPLLLRALRALGQQPGLELVDASPRELLAWGIRHWDAGKIPR 283
              +  AL  LGQ P       S + +LA  +  ++  +IPR
Sbjct: 271 QASINAALAFLGQAP---CDIDSVKTMLAQAVSQFELSRIPR 309