Pairwise Alignments

Query, 139 a.a., Type IV pilin PilA from Pseudomonas fluorescens FW300-N2E2

Subject, 138 a.a., pilin, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.5 bits (127), Expect = 1e-12
 Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 10/105 (9%)

Query: 1   MNKQS-GFTLIELLIVVAIIGILATFALPQYSKYQARAKATAGLAEVSALKVPFEDVMNQ 59
           MNKQ+ GFTLIEL+IVVAIIGILA  ALP Y +Y A +   A +  ++      +  +  
Sbjct: 6   MNKQAQGFTLIELMIVVAIIGILAAVALPAYREYVATSHGGASMKGLAGYVTKAQACIQT 65

Query: 60  GTNPSL--------ANIGGTSPTSNCTLTASGTAADGAGTIACTL 96
           G   +           I  T   +  T TA  T  DG  T+  T+
Sbjct: 66  GVGCATIGTEITADPKIAATPDVAEATATAL-TYDDGTCTVTATI 109