Pairwise Alignments

Query, 289 a.a., Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 303 a.a., prepilin peptidase (RefSeq) from Shewanella loihica PV-4

 Score =  293 bits (751), Expect = 2e-84
 Identities = 139/299 (46%), Positives = 197/299 (65%), Gaps = 18/299 (6%)

Query: 3   LSEFFVL---YPLAFVLVAALLGLIIGSFLNVLVWRLPKMLNREWRLQAH---------- 49
           ++EF  L   YPL F  ++ +   +IGSFLNV++ RLP M+ REW+ + +          
Sbjct: 1   MTEFIQLMAQYPLLFAAISFVFAAVIGSFLNVVIHRLPVMMKREWQEECNQYLDEYHKAT 60

Query: 50  -----DLLGLPAETPGPVYNLMLPHSQCPHCGHRIRAWENIPLLSYLMLRGRCSSCAAPI 104
                D L  P +     YNL++P S CP C   I+ W N+P++ +LML G+C+ C   I
Sbjct: 61  VTEIKDKLAQPIDDFPEKYNLIVPGSSCPKCKTDIKPWHNLPVIGWLMLGGKCAHCKTSI 120

Query: 105 GRRYPLTELACGALSAFVAWHFGFGWHAVMVMVLTWGLLGMSLIDAEHQLLPDSLVLPLL 164
             RYP+ E   G   A++A+HFG  W  V   +LT+GL+ ++ ID +  LLPD + LPLL
Sbjct: 121 SVRYPIIEALTGFAVAYLAYHFGPTWQFVFATLLTFGLIALTGIDLDEMLLPDQITLPLL 180

Query: 165 WLGLIINSFGLFVPLNQAMWGAVAGYLALWSLFWVFKLVTGKEGMGYGDFKLLAMLGAWG 224
           WLGL+IN  G +V +  A+ GA AGY++LWS+FW FK++TGKEGMGYGDFKLLA+ GAW 
Sbjct: 181 WLGLLINLNGTYVSITDAVIGASAGYMSLWSVFWGFKILTGKEGMGYGDFKLLAVFGAWF 240

Query: 225 GWQILPLTLLLSSLVGAVVGVIMLRLRDTPESTQIPFGPYLAIAGWIALLWGGQITDFY 283
           GWQ+LPL +LLSS+VGA+VG++++  +       IPFGPY+A+AGWIA++WG  I ++Y
Sbjct: 241 GWQLLPLIILLSSIVGALVGLLLIVNKKINSGNPIPFGPYIALAGWIAMIWGENIVNWY 299