Pairwise Alignments

Query, 157 a.a., type 4 fimbrial biogenesis protein FimU from Pseudomonas fluorescens FW300-N2E2

Subject, 170 a.a., type IV pilus biogenesis protein, putative (RefSeq) from Shewanella loihica PV-4

 Score = 55.8 bits (133), Expect = 3e-13
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)

Query: 7  GFTLIEVLVALGVLLILITMAVPSFTGSLQSTKADTEVDDLRRALNFARMEAIDRGTTTR 66
          GFTLIE++V L V  IL+++ +PS T   Q+ +AD  +  +++ L FAR  AI+ G    
Sbjct: 6  GFTLIELMVTLAVATILLSVGLPSLTDLYQAYRADAAIKMIQQTLQFARNTAINYGLRVT 65

Query: 67 IRPTVDGAA---WSSELTVYDSTGSS 89
          + P  D      W   L V+  +G+S
Sbjct: 66 VCPIKDNQCTNDWHLGLGVFTDSGTS 91