Pairwise Alignments

Query, 285 a.a., Quinate/shikimate 5-dehydrogenase I delta (EC 1.1.1.25) from Pseudomonas fluorescens FW300-N2E2

Subject, 287 a.a., shikimate 5-dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 84.3 bits (207), Expect = 3e-21
 Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 7/216 (3%)

Query: 68  GLNITFPCKQAIIPLLDELSPEARGIGAVNTV-VLKDGKRIGHNTDCLGFAEGFRRGLGD 126
           G N+T P K+    L D LS EA   GAVNT+ +L DG   G NTD LG        LG 
Sbjct: 64  GANVTVPFKEQAFALCDSLSAEAALAGAVNTLSLLADGSIRGDNTDGLGLVADLISHLGS 123

Query: 127 VARRRVVQMGAGGAGAAVAHALLAEGVQTLSIFDVEVSRAEALANNLNQ-HFGVGRAR-A 184
           +  +RV+ +GAGGA       LL  GV  L I +   ++A+ L +  +Q   G+ + +  
Sbjct: 124 LQHKRVLLVGAGGAARGCILPLLNAGVGQLVITNRTQTKAKDLVDIFSQLEEGIYKDKLQ 183

Query: 185 GHDLSAAMAEADGLVNTTPMGMA-KLPGMPVPVELLHGQLWVAEIVYFPLETELLRNARA 243
              +S    E + ++N+T   +A +LP  P+P  ++       +++Y  + T   + A  
Sbjct: 184 ALSMSELTGEFELVINSTSASLAGELP--PLPQSIIGSTTVCYDMMYGAMPTAFNQWALQ 241

Query: 244 LG-CRTLDGGNMAVFQAVKAFELFSGVAPDAQRMLE 278
            G  + +DG  M V QA K+F L+  V PD   +L+
Sbjct: 242 QGAAKVIDGLGMLVGQAAKSFALWRTVEPDTAVVLK 277