Pairwise Alignments

Query, 188 a.a., Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

Subject, 293 a.a., Pseudouridine synthase, Rsu (NCBI) from Rhodospirillum rubrum S1H

 Score =  107 bits (266), Expect = 3e-28
 Identities = 65/187 (34%), Positives = 103/187 (55%), Gaps = 17/187 (9%)

Query: 5   PPAEP-KLILFNKPFDVLTQFSDGEGRATLKDFID--VPGIYPAGRLDRDSEGLLLLTND 61
           P  EP +L  +NKP  ++T   D +GR T+ + +   +P +   GRLD +SEGLLLLTND
Sbjct: 60  PALEPARLWRYNKPIGLVTSHRDEQGRPTVFERLPATLPRVISVGRLDLNSEGLLLLTND 119

Query: 62  GQLQARIADPKHKLAKTYWVQVEGEPNAEQLQRLRDGVALNDGMTLPAEARQLDEPQLWP 121
           G+L  R+  P     + Y V+V G P+  +L  L  GV + +G+   +    L+      
Sbjct: 120 GELARRLEHPSQGWLRRYRVRVHGAPDPVKLAALEKGVTV-EGVAYGSIRVALE------ 172

Query: 122 RNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTLEGLDQGQW 181
                  R+    +WL + +REG+NR++RR+   +GLP  RL+RV  G + L  L++G  
Sbjct: 173 -------RQQGANAWLSVSLREGKNREIRRVMEHLGLPVSRLIRVAYGPFQLGQLEEGTV 225

Query: 182 REVPARL 188
            E+P ++
Sbjct: 226 DEIPGKI 232