Pairwise Alignments

Query, 188 a.a., Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

Subject, 182 a.a., pseudouridine synthase (RefSeq) from Shewanella loihica PV-4

 Score =  122 bits (306), Expect = 4e-33
 Identities = 79/174 (45%), Positives = 103/174 (59%), Gaps = 12/174 (6%)

Query: 16  KPFDVLTQFSDGEGRAT---LKDFIDVP-GIYPAGRLDRDSEGLLLLTNDGQLQARIADP 71
           KP+  L+QF  GE R     L +  + P GI   GRLD DSEGLLLLT DG+    +   
Sbjct: 4   KPYGYLSQFV-GERRKRKPLLGELANFPTGIMAIGRLDHDSEGLLLLTTDGKTSHAVRSK 62

Query: 72  KHKLAKTYWVQVEGEPNAEQLQRLRDGVALN----DGMTLPAEARQLDE-PQLWPRNPPV 126
              + K Y++Q++GE   + +  L +GV +        TLP  AR+LD+ P L PR   +
Sbjct: 63  S--IEKEYYLQLDGEITEQAISSLCEGVEIGIKGEKYRTLPCRARRLDQAPDLPPRGRKI 120

Query: 127 RFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTLEGLDQGQ 180
           R  +  PTSWL + I EG+NRQ+R+MTAAVG  TLRLVRVRIGD  L  L  G+
Sbjct: 121 RDARHGPTSWLAITITEGKNRQLRKMTAAVGFATLRLVRVRIGDIRLGTLQPGE 174