Pairwise Alignments

Query, 631 a.a., Penicillin-binding protein 2 (PBP-2) from Pseudomonas fluorescens FW300-N2E2

Subject, 648 a.a., penicillin-binding protein 2 from Phaeobacter inhibens DSM 17395

 Score =  396 bits (1017), Expect = e-114
 Identities = 236/613 (38%), Positives = 349/613 (56%), Gaps = 18/613 (2%)

Query: 7   IKDHEKDARLVRGRVVFGAIMVVTLICVLIARLYFLQVIQYEYHSTLSENNRVHVQPIPP 66
           +KD E   R +  R +    + +     L  R+  LQV Q +    L+E NR++++ IPP
Sbjct: 5   VKDVEASHRKLSRRALLLGGLQLAFAGGLAMRMRHLQVDQADQFRLLAEENRINLRLIPP 64

Query: 67  TRGLIFDRNGVVVADNRPSFSLSMTRERSGDWQHVLDVIVEVLQLTPEDRAIFEKRMRQG 126
            RG I+DRNG ++A N  S+ +++  E +GD   V+  +  +L L PED    E+ M + 
Sbjct: 65  ARGQIYDRNGTILAQNAQSYRITVVPEDAGDVGDVIGKLSRLLTLDPED---IERAMAEM 121

Query: 127 RR--PFEPVPILFELTEEQIALIAVNQFRLPGVEVVAQLVRHYPQGPHFAHSVGYMGRIN 184
           RR  PF P+ +  +++ + I+ +AVN   LPG+     L R YPQ   FAH VGY+G ++
Sbjct: 122 RRSPPFLPITLADQISWDDISKVAVNAPALPGITPEVGLTRVYPQQEDFAHVVGYVGPVS 181

Query: 185 EKELKTLD---PVNYSGTHHIGKTGIERFYEPELHGQVGYEEVETNARGRVLRVLKRTDP 241
           + +L  ++   PV       IGK G E   E  L G+ G + VE NA GRV+R L R + 
Sbjct: 182 DYDLSKMEDPEPVLMIPRFQIGKVGFEAKREDVLRGKAGAKRVEVNATGRVMRELDRREG 241

Query: 242 IPGKDIVLSLDIKLQEAAEAALGGRRGAVVALDPNTGEVLAMVSQPSFDPNLFVTGISFK 301
             G D+ L++D  LQ   +A LG    + V +D  +G+V A+ S PSFDPNLFV GIS  
Sbjct: 242 EAGADMQLTVDADLQYYTQARLGKESASAVVIDCESGDVRAIASSPSFDPNLFVRGISVA 301

Query: 302 AYAELRDSIDRPLFNRVLRGLYPPGSTIKPAVAIAGLDSGVVTASSRVYDPGYYQLPNYD 361
            Y  L +   RPL N+ ++G YPPGST K   A+A L+ G++     V+ PG+ ++    
Sbjct: 302 DYRMLTEDPYRPLANKSVQGTYPPGSTFKMITALAALEEGLIGTEDTVWCPGHLEVSG-- 359

Query: 362 HKYRNWNRTGDGYVDLETAIMRSNDTYFYDLAHKLGIDRLSSYMNKFGLGQKVSLDMFEE 421
            ++  W R G G+VDL T++  S D Y+YDLA K+GID++S+   +FGLG +  L M   
Sbjct: 360 RRFHCWKRAGHGHVDLNTSLKSSCDVYYYDLAIKVGIDKISAMAKRFGLGVRHDLPMSAV 419

Query: 422 SPGLMPSREWKRATRRQAWFPGETLILGIGQGYMQATPLQLAQATALVASKGKWYRPHLA 481
           + G+ P++EWK  T  Q W  G+T+   IGQGY+ A+P+QLA  TA +A+ G+   P L 
Sbjct: 420 AKGIAPNKEWKSRTYGQDWLVGDTVNSSIGQGYLLASPMQLAVMTARLAT-GRSVTPRLL 478

Query: 482 KTIEGQKPVDPDPMPDIILRNPSDWQKVNNGMQQVMHGARGTARKASIGAQ-YRIAGKSG 540
           K+I+G +   P    + I  N ++ + +  GM  V +  RGT  ++ I A   R+AGKSG
Sbjct: 479 KSIDGVE--QPSGAGEPIGVNENNLRTIRRGMYSVSNERRGTGYRSRIIADGMRMAGKSG 536

Query: 541 TAQVVAIKQGEK----YDRSKVQERHRDHALFVGFAPADNPKIVVSVMVENGESGSGVAA 596
           T+QV  I   E+         +    RDHALFV +APAD+PK  V+V+VE+G  GS  AA
Sbjct: 537 TSQVRNITAAERAAGVIRNEDLPWERRDHALFVAYAPADDPKFAVAVVVEHGGGGSKAAA 596

Query: 597 PVVRQIMDAWLLD 609
           P+ R ++   L D
Sbjct: 597 PIARDVLLQALYD 609