Pairwise Alignments

Query, 295 a.a., Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) from Pseudomonas fluorescens FW300-N2E2

Subject, 301 a.a., farnesyl-diphosphate synthase from Synechococcus elongatus PCC 7942

 Score =  259 bits (661), Expect = 7e-74
 Identities = 143/292 (48%), Positives = 193/292 (66%), Gaps = 5/292 (1%)

Query: 4   AYQASSQARVNAALDSLFSAPSPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGGQAE 63
           +Y    Q +V AAL+++     P L  +YE+MRYS++  GKR+RP+L  A+CE  GG A 
Sbjct: 13  SYLKERQRQVEAALNAILPPQDPPL--IYESMRYSLLAEGKRLRPILCLASCELAGGTAA 70

Query: 64  QANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKQFDEACAILAGDGLQSLAFSA 123
            A   ACA+E++H  SL+HDDLP+MD+DD RRG+PT HK + E  AILAGD L + AF A
Sbjct: 71  IALPTACALEMVHTMSLIHDDLPSMDNDDFRRGRPTNHKVYGEDIAILAGDALLTYAFEA 130

Query: 124 LLDPALSDCPAQVRLDMVSALALAAGPAGMVGGQAIDLGSVGL-KLDQSALEYMHRHKTG 182
           +      + PA   L +++ALA A G  G+VGGQ +DL S G   ++   L Y+H HKTG
Sbjct: 131 IARHT-PEVPADRVLKVIAALARAVGAEGLVGGQVVDLQSEGRDDVNLETLHYIHTHKTG 189

Query: 183 ALIEASVRLGALASGRATPAQLQALQTYARAIGLAFQVQDDILDVESDTQTLGKRQGADI 242
           AL+E SV  GA+ +G +   Q Q L+TYA+ IGLAFQV DDILD+ +  + LGK  G D+
Sbjct: 190 ALLEVSVVSGAILAGASEELQEQ-LRTYAQKIGLAFQVIDDILDITATAEELGKTAGKDL 248

Query: 243 ARDKPTYPALLGLDAAKAYALELRDQALAALRPFDAAAEPLRDLARYIVERR 294
           A  K TYP+LLGLDA++ YA +L  +A AA+  F A A+PLR +A YI  R+
Sbjct: 249 AAKKATYPSLLGLDASREYADQLITEAKAAIAAFGAEADPLRAIADYITARK 300