Pairwise Alignments

Query, 363 a.a., Anhydro-N-acetylmuramic acid kinase (EC 2.7.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 369 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  326 bits (835), Expect = 7e-94
 Identities = 176/367 (47%), Positives = 235/367 (64%), Gaps = 7/367 (1%)

Query: 2   ALYIGVMSGTSLDGLDIALIELT-PAIKLIATHYIPMPAALRTELLGLCSSGPDEIARSA 60
           A YIG+MSGTS+DG+D  L++      +LI TH   +P  L   L  LC  G DEI R  
Sbjct: 4   AYYIGLMSGTSMDGVDAVLVDFAGEQPQLIGTHTETIPTHLLKGLQRLCLPGTDEINRLG 63

Query: 61  ITQQSWVKLAAQGIHTLLNEQKLKPEDITAVGSHGQTIRHEPAR--GFTVQIGNPALLSE 118
              +S  KL A  ++ LL + K+  ++I A+GSHGQT+RH P    GFT+QIG+P  ++ 
Sbjct: 64  RLDRSVGKLFALAVNNLLAKTKIAKDEIIAIGSHGQTVRHMPNLEVGFTLQIGDPNTIAT 123

Query: 119 LTRIAVVSDFRSRDVAAGGQGAPLVPAFHEALFEERAGNRAVLNVGGFSNLSLIEP-AKP 177
            T I V++DFR +D+A GGQGAPLVPAFH+  F +    R +LN+GG +N++ +   ++ 
Sbjct: 124 ETGIDVIADFRRKDIALGGQGAPLVPAFHQQTFAQVGKKRVILNIGGIANITYLPGNSEE 183

Query: 178 VAGFDCGPGNVLLDAWIHQQRGEHFDRDGQWAASGKVEPVLLKALLSDPFFVTKGPKSTG 237
           V GFD GPGN L+DAW+ Q + E +D++G WAASGK +P LL  LLS P+F    PKSTG
Sbjct: 184 VLGFDTGPGNTLIDAWVQQVKNESYDKNGAWAASGKTDPQLLAQLLSHPYFSLAYPKSTG 243

Query: 238 REVFNLPWLTQHLSQLPAFAPEDVQATLLELTALTIVES-LQHAQSNTQELLVCGGGAHN 296
           RE+FN  WL Q LS       ED+Q+TLL+LT  +I +  L+ AQ    EL VCGGGA N
Sbjct: 244 RELFNQAWLEQQLSAFNQLNEEDIQSTLLDLTCHSIAQDILKLAQEG--ELFVCGGGAFN 301

Query: 297 QALMKRLAELLPDTKVSSTAVYGVDPDWVEAMAFAWLAHCCLEGIPGNRPSVTGACGLRV 356
             LM+RLA LLP  ++ +T+  GVDP W E +AFAWLA     G+P N P+VTGA    +
Sbjct: 302 AELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMRYQLGLPANLPAVTGASREAI 361

Query: 357 LGAIYPA 363
           LG  + A
Sbjct: 362 LGGRFSA 368