Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 694 a.a., DNA primase from Synechococcus elongatus PCC 7942

 Score =  264 bits (675), Expect = 9e-75
 Identities = 163/414 (39%), Positives = 234/414 (56%), Gaps = 13/414 (3%)

Query: 16  RTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGCGAGGNALGFIM 75
           R DIVD+VS ++ +KK GK++   CPFH +K+PSF+VSP KQFYYCF CGAGGN + F+M
Sbjct: 17  RADIVDIVSEQVVLKKRGKDFVGLCPFHDDKSPSFTVSPAKQFYYCFSCGAGGNPIKFLM 76

Query: 76  DHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSP---LYPLLTAAADFYRQALK 132
           +     F + V +LAK   + + R    +QH+  Q   S    LY +L  A  FY Q+L+
Sbjct: 77  ELGKQSFSEVVLDLAKRYQVPV-RTLEVQQHQELQRQLSRRERLYEVLAVATQFYEQSLR 135

Query: 133 SHPARKAAVDYLK-GRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQRAMID-AGLLI 190
             P   AA+DYL+  R L     + F LG+AP  W +L  HL         +++ AGL++
Sbjct: 136 -RPEGAAALDYLRRSRQLQESTIQKFQLGYAPAQWASLATHLIEQKRFPADLVEEAGLVV 194

Query: 191 ENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYGL 250
                   YDRFRDR+M PI D +GR++ FGGR L  ++PKYLNSPET +F KG+ L+GL
Sbjct: 195 ARRNGQGYYDRFRDRLMIPIHDLQGRVVGFGGRTLTGEEPKYLNSPETTLFEKGKLLFGL 254

Query: 251 YEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLFRVVPN--VLF 308
            +AR      D+ +VVEGY DVIAL   G+ +AVA+LGTA S + +K L R   +  ++ 
Sbjct: 255 DKARAAIAKQDQAVVVEGYFDVIALHAAGIDHAVASLGTALSRQQVKLLSRYSESNQIVL 314

Query: 309 CFDGDQAGRNAAWRALEATLPCLQDGR-RARFLFLPEGEDPDTLVRSEGTDAFRARINQH 367
            FD D+AG  AA RA+         G+ + R L LP G+D D  ++      +R  + + 
Sbjct: 315 NFDADRAGAKAAERAIGEVEDLAYQGQVQLRVLNLPGGKDADEYLQRHSVADYRELLAR- 373

Query: 368 AQPL-ADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLSE 420
             PL  D+   QL  + +    +    +      L+ K+P   LRT    +++E
Sbjct: 374 -SPLWLDWQIDQLLRDRNLDQADQFQAVVQAIVQLLGKLPNTPLRTHYVHQVAE 426