Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 667 a.a., DNA primase from Sinorhizobium meliloti 1021

 Score =  286 bits (732), Expect = 2e-81
 Identities = 165/425 (38%), Positives = 243/425 (57%), Gaps = 17/425 (4%)

Query: 8   SFIDDLLNRTDIVDVVSSRLQMKKAGKN-----YTACCPFHKEKTPSFSVSPDKQFYYCF 62
           SF+D++ +R  I DV+  R+   +   N     Y ACCPFH EK+PSF     K  Y+CF
Sbjct: 6   SFLDEIRDRVPISDVIGKRVTWDRRKTNVSRGDYWACCPFHGEKSPSFHCEDRKGRYHCF 65

Query: 63  GCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLLTA 122
           GCG  G+   F+ + + L FP+AV+++A  AG+ +P+ +   + + R+ T   L  ++  
Sbjct: 66  GCGVSGDHFRFLTELEGLSFPEAVQQIADLAGVPMPQPDPQAEQRERERTS--LLDVMEL 123

Query: 123 AADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQRA 182
           A  F++  L++    KA   YL+ RGLTG     F LGFAP   + L + L+   + +  
Sbjct: 124 ATQFFQDQLQTANGAKARA-YLRERGLTGRTIETFRLGFAPDSRNALKEFLAGKGIGKEQ 182

Query: 183 MIDAGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKP-KYLNSPETPVF 241
           +   GL++        YDRFRDR+MFPI   R ++IAFGGR +  D P KYLNS ET +F
Sbjct: 183 IEACGLVVHGDGIPVSYDRFRDRIMFPIPSAREKVIAFGGRAMSPDAPAKYLNSNETELF 242

Query: 242 HKGQELYGLYEARKNNRNLD---EIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKR 298
           HKG  L+    AR+ ++  D    II VEGYMDVIAL Q G+ NAVA LGTA +E  +  
Sbjct: 243 HKGNVLFNFARARRASQGADGAGTIIAVEGYMDVIALHQAGIENAVAPLGTALTENQLDL 302

Query: 299 LFRVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTD 358
           L+++    + CFDGD AG  AA RA++  LP L+ GR  RF  LPEG+DPD +VR +G +
Sbjct: 303 LWKMTTQPVLCFDGDGAGVRAAHRAVDLALPHLKPGRSVRFALLPEGKDPDDVVRHDGRE 362

Query: 359 AFRARINQHAQPLADYFFQQLTEEAD----PRSLEGKAHMATLAAPLIDKVPGANLRTLM 414
            F  ++  +A+ LAD  +Q+  +  D     +  E +A +  + + + D+    +    M
Sbjct: 363 PF-DKVLANARSLADMVWQREVQGGDFDTPEKRAELEARLRQVTSVIADESVRRHYGQDM 421

Query: 415 RQRLS 419
           R RL+
Sbjct: 422 RDRLN 426