Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 576 a.a., DNA primase (RefSeq) from Shewanella amazonensis SB2B

 Score =  463 bits (1191), Expect = e-134
 Identities = 264/634 (41%), Positives = 371/634 (58%), Gaps = 67/634 (10%)

Query: 5   IPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFGC 64
           IP+ FI+DL+ RTDIV+++  ++ +KKAGKNY+ACCPFH EK+PSF+VS DKQFY+CFGC
Sbjct: 3   IPRDFINDLIARTDIVELIDRKVPLKKAGKNYSACCPFHSEKSPSFTVSRDKQFYHCFGC 62

Query: 65  GAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLLTAAA 124
           GA GNA+ F+M++D L+F  A+E+LA   G+E+PRE+ G   +  +     LY L+  AA
Sbjct: 63  GAHGNAIDFVMEYDRLNFVDAIEDLAGQLGLEVPREQ-GTGPRRDEGLARDLYQLMEEAA 121

Query: 125 DFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQQRAMI 184
             Y+  L+ H  ++   +YL  RGL+ E+  DFG+GFAP GWD L     ++   Q  ++
Sbjct: 122 RHYQTQLRQHADKQKVDEYLALRGLSKEVVEDFGIGFAPDGWDGLLGRYRTNPDAQDKLL 181

Query: 185 DAGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPVFHKG 244
             G+LIEN + GKRYDRFRDR+MFPIRD RGR+I FGGRVLGD  PKYLNSPETP+FHKG
Sbjct: 182 TGGMLIEN-DGGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIFHKG 240

Query: 245 QELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLFRVVP 304
           QELYGLYE ++ +R+ + +++VEGYMDV+ALAQ G+  AVA+LGT+T+ E  + L R   
Sbjct: 241 QELYGLYELKQKHRDPERVMIVEGYMDVVALAQFGIDYAVASLGTSTTAEQFQLLLRSAK 300

Query: 305 NVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDAFRARI 364
            V+ C+DGD+AG  AAWRA+E  LP L+ G +  FLFLP+GEDPD+ VR EG +AF  RI
Sbjct: 301 EVICCYDGDKAGYEAAWRAMETALPLLKPGDKVTFLFLPQGEDPDSQVRKEGKEAFEMRI 360

Query: 365 NQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLSEITGL 424
           + +A PLADY F  L+++        K ++A  A  LI+K+    L  L+ + L+   G+
Sbjct: 361 D-NALPLADYLFDTLSQKYG----TDKGNLAKQAIALIEKIKDTVLANLLLENLAHKLGM 415

Query: 425 NSEAVNQLVHSAPQEAPPAYDPGIDYDAMPDFADYHQPQQDYAPQQEWTPKKTGSGGKKW 484
           NS                                            E   KK G      
Sbjct: 416 NS-------------------------------------------SEDLRKKLGLTSMST 432

Query: 485 DKKPWDKNGKRGDRDQPRAPRVPAAVEPPTLAALRTLLHHPQLAEKVEDAGHFAAEDHSN 544
             K   K G +G                P   A+  L+ HP+L  K+      +    + 
Sbjct: 433 GAKAMAKKGLKGR-------------GTPLRLAISLLVQHPELGHKLPVQPALSHIRMTG 479

Query: 545 TQLLVALLEAVQKNPKLNSFQLIARWHGTEQGRLLKALAEKEWLIEGDNLEQQFFDTITS 604
            +LL+ LLE + +   L++ QL+  +  +E    L  LA+ E  I  DN+ Q+F   +  
Sbjct: 480 IELLIQLLE-LTREQVLSTAQLLESYRDSEHWGPLTKLAQWEHQIAEDNVAQEFRKALVW 538

Query: 605 LSARQRERNLEQLLRKARQSELTSEEKNQLRDLL 638
           L+ +  E+  ++L  K    +LT EEK QL+ L+
Sbjct: 539 LNNQYIEQRYQELSIK---PDLTREEKLQLQKLI 569