Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 749 a.a., DNA primase DnaG from Phaeobacter inhibens DSM 17395

 Score =  293 bits (750), Expect = 2e-83
 Identities = 174/457 (38%), Positives = 250/457 (54%), Gaps = 16/457 (3%)

Query: 5   IPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYT-----ACCPFHKEKTPSFSVSPDKQFY 59
           +P  F+D+L  R  +  VV  ++   +   N       A CPFH EK+ SF V   K FY
Sbjct: 3   LPPGFLDELRTRVSLTQVVGRKVMWDQRKSNQGKGDMWAPCPFHHEKSASFHVDDRKGFY 62

Query: 60  YCFGCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPL 119
           YCFGC A G+AL F+ + +N+ F +AV+ LA+ AGME+P  +   Q K  Q   + L  +
Sbjct: 63  YCFGCHAKGDALKFVQETENVGFMEAVQILAQEAGMEMPARDPRAQQK--QDHRAQLAEV 120

Query: 120 LTAAADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNLYKHLSSDTLQ 179
           +  A  F+R  L +  A + A  YL  RGL+G     + +GFAP GW NL+  L    + 
Sbjct: 121 MEQAVRFFRLQLNTR-AGEGARSYLARRGLSGPALERWEIGFAPEGWQNLWDALRGKGVP 179

Query: 180 QRAMIDAGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGD-DKPKYLNSPET 238
           +  ++ AGL   + + GK YD FR+R+MFPIRD RGR IAFGGR +   D  KYLNSPET
Sbjct: 180 EELIMGAGLAKPSNKGGKPYDTFRNRIMFPIRDARGRAIAFGGRAMDPRDNAKYLNSPET 239

Query: 239 PVFHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKR 298
            +F KG+ LY    AR  +    +++V EGYMDVIALA+ G   +VA LGTA +E  ++ 
Sbjct: 240 ALFDKGRSLYNHGPARTASGKSGQLLVAEGYMDVIALAEGGFEASVAPLGTAITENQLQM 299

Query: 299 LFRVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTD 358
           L+R+    +   DGD AG  AA R ++  LP L+ G+  RF  +PEG+DPD L+R EG +
Sbjct: 300 LWRIADEPIIALDGDTAGLRAAMRLIDLALPLLEAGKSLRFALMPEGKDPDDLIRGEGRE 359

Query: 359 AFRARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRL 418
           A +A ++Q A P+    +Q+   E + +  +     A L   L DK+      ++ R   
Sbjct: 360 AVQAVLDQ-AMPMVRLLWQR---ETEGKVFDSPERKAALDKALRDKIRLIRDPSIRRHYG 415

Query: 419 SEITGLNSEAVNQLVHSAPQEAPPAYDPGIDYDAMPD 455
            ++  L  E         P+E        + +DA PD
Sbjct: 416 EDLQDLRWELFR---GGRPREEAAGSGLDLGFDAAPD 449