Pairwise Alignments

Query, 652 a.a., DNA primase (EC 2.7.7.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 584 a.a., DNA primase, catalytic core from Dechlorosoma suillum PS

 Score =  394 bits (1013), Expect = e-114
 Identities = 210/447 (46%), Positives = 289/447 (64%), Gaps = 16/447 (3%)

Query: 4   LIPQSFIDDLLNRTDIVDVVSSRLQMKKAGKNYTACCPFHKEKTPSFSVSPDKQFYYCFG 63
           +IP+SF+ +LL+R DIVD++   + +KKAG NY ACCPFH EK+PSF+VSP KQFY+CFG
Sbjct: 1   MIPESFLQELLHRVDIVDLIDGYVPLKKAGANYAACCPFHNEKSPSFTVSPTKQFYHCFG 60

Query: 64  CGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPREESGRQHKPRQPTDSPLYPLLTAA 123
           CGA G A+ F+M++  L F  AV+ELA   GM +P E    +H+   P  + L  ++  A
Sbjct: 61  CGAHGTAIRFLMEYSGLGFIDAVKELAGRMGMVVPEEAGRVRHEG--PRTAELTEVMGKA 118

Query: 124 ADFYRQALKSHPARKAAVDYLKGRGLTGEIARDFGLGFAPPGWDNL---YKHLSSDTLQQ 180
           A +Y + LK     K   +YLK RGLTGEIA  F +G+AP G   L   + +  +  L++
Sbjct: 119 AQYYFEQLKHSDKAK---EYLKRRGLTGEIALKFRIGYAPEGKYGLKGAFPNYDAPELEK 175

Query: 181 RAMIDAGLLIENAETGKRYDRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPV 240
                   L++  E G+RYDRFRDRVMFPI + +  +IAFGGRV+   +PKYLNSPETP+
Sbjct: 176 AG------LVKQTEDGRRYDRFRDRVMFPIINQKNEVIAFGGRVIDQGEPKYLNSPETPL 229

Query: 241 FHKGQELYGLYEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHMKRLF 300
           F KG+EL+GL +AR+  R  + +IVVEGYMDV+ALAQ G+ NAVATLGTAT+  H+++L 
Sbjct: 230 FEKGRELFGLPQARQALREKNTVIVVEGYMDVVALAQHGVGNAVATLGTATTATHVQKLL 289

Query: 301 RVVPNVLFCFDGDQAGRNAAWRALEATLPCLQDGRRARFLFLPEGEDPDTLVRSEGTDAF 360
           R V  +++CFDGD AGR AAWR LE +L  L D +   F+FLP   DPD+ VR  G +AF
Sbjct: 290 RQVDRIVYCFDGDAAGRKAAWRGLENSLESLADNKSIGFVFLPPEHDPDSYVRELGKEAF 349

Query: 361 RARINQHAQPLADYFFQQLTEEADPRSLEGKAHMATLAAPLIDKVPGANLRTLMRQRLSE 420
              I+Q A PL+D+  ++L    D  + EGK+ +   A PLI ++    LR  + +RL+E
Sbjct: 350 ERMIDQ-AMPLSDFLLKELASHCDLTTSEGKSKLVYEAKPLIQRLATPLLRLQLVKRLAE 408

Query: 421 ITGLNSEAVNQLVHSAP-QEAPPAYDP 446
            +  + + V +L    P   A PA  P
Sbjct: 409 ASSFSQQEVERLCDLKPVARAAPARAP 435