Pairwise Alignments

Query, 389 a.a., Coenzyme PQQ synthesis protein E from Pseudomonas fluorescens FW300-N2E2

Subject, 393 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 88/343 (25%), Positives = 142/343 (41%), Gaps = 32/343 (9%)

Query: 29  ELTYRCPLQCPYCSNPLDFAEQGQELSTEQWFKVFREAREMGAAQLGFSGGEPLVRQDLA 88
           E+T  C L C +C           E ST++   +     ++G   + F+GG+P++R D+ 
Sbjct: 52  EVTRSCNLACKHCRAEAHMEPYPGEFSTDEAKALIDTFPDVGNPIIIFTGGDPMMRGDVY 111

Query: 89  ELIGEARRLGFYTNLITSGIGLTEQKISDFKKAGLDHIQISFQASDEQVNNLLAGSKKAF 148
           ELI  A   G    +  +G  +T +     K +G+    IS    D   ++   G   AF
Sbjct: 112 ELIAYATDKGLRCVMSPNGTLITPEHAQRMKASGVQRCSISIDGPDAASHDAFRGVPGAF 171

Query: 149 AQKLEMARAVKAHGYPMVLNFVTHRHNIDKIDRIIELCIALEA----DFVELATCQFYGW 204
            Q +     ++  G    +N    R N+     I +LC  + A     F+ + T +  G 
Sbjct: 172 EQSMRGIGYLRDAGIEFQINTTVTRDNLHSFKDIFKLCERIGAVAWHIFLLVPTGRAAGL 231

Query: 205 -------AQLNRV-----GLLPTREQLVRAERVTNEY---RAKLEAEGNPCKLIFVTPDY 249
                  A+   V         T    ++A    + Y   R + + EG     + VTPD 
Sbjct: 232 SDQVISAAEYEEVLNWFYDFRKTTSMHLKATCAPHYYRIMRQRAKEEG-----VSVTPDN 286

Query: 250 Y--EERPKGCMNGWGSIFLTVTPDGTALPCHGARQLPVQFPNVRDHSMQHIWYDSFGFNR 307
           +  +   +GC+ G G  F++ T  G   PC     L +   NVR+     IW  S  F +
Sbjct: 287 FGMDAMTRGCLGGTGFCFISHT--GQVQPC---GYLELDCGNVRNTPFPEIWRKSEHFRQ 341

Query: 308 FRGYDWMPEPCRSCDEKEKDFGGCRCQAFMLTGDASNADPVCS 350
           FR  +     C  C E  K  GGCR +A+ ++GD    +P+CS
Sbjct: 342 FRTQEEYTGKCGPC-EYHKVCGGCRARAYNMSGDHMAEEPLCS 383