Pairwise Alignments

Query, 295 a.a., Protein rarD from Pseudomonas fluorescens FW300-N2E2

Subject, 310 a.a., RarD protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  218 bits (556), Expect = 1e-61
 Identities = 123/286 (43%), Positives = 174/286 (60%), Gaps = 9/286 (3%)

Query: 3   AANPRRGYILGLSAYIIWGLFPIYFKAIASVPSVEIIIHRVLWS-ALFGAALLLVWKHPG 61
           A +  RG    L AY +WG+ P++FKA++ V ++EI+ HRVLW+  + G  L L  +   
Sbjct: 15  AGSSARGVAAALGAYGVWGISPLFFKAVSEVSALEILSHRVLWAMVVMGITLGLRGELAA 74

Query: 62  WWRELRDNPQRLAILALSGTL-IAANWLTYVWAVNNERMLEASLGYYINPLVNVLLGMLI 120
             R L +  +R+ +L L+ T+ I+ NWLT++ A  +   ++ SLGYYI PLV V+LG L+
Sbjct: 75  SLRFLAN--RRVFLLMLAATVAISINWLTFIHAATSGHAMQGSLGYYIFPLVTVVLGRLV 132

Query: 121 LGERLRRMQWLAVGLAAVGVAQQVWQVGSLPWVSLVLALTFGFYGLIRKQAPVKALPGLV 180
           LGE + R Q LAV LAA GV   +W+ GSLPW+SL LA TF  YGLIRK   V  L GL 
Sbjct: 133 LGEEMSRRQGLAVALAAAGVGIALWRTGSLPWISLTLASTFALYGLIRKTVSVPPLAGLF 192

Query: 181 VETWMLVPIAIAWLLFNPTATSAQAAF---WTTSEAWWLVAAGPVTLVPLVCFNAATRHL 237
           +E  +L P+ I  L +        A F   W    + WL+A GP+T VPL  F  A R L
Sbjct: 193 IEALLLSPVLIGLLAWIELKGGGLAFFDGPW--GRSLWLMALGPLTAVPLFFFTWAARRL 250

Query: 238 PYTTIGFLQYIAPTLVLLLAVMLFGEHLSSSTLVAFLFIWAGLAVY 283
             +T+G +QY  PT+   LA ++F E ++++ L+ F FIWAG+A+Y
Sbjct: 251 RLSTLGVIQYTNPTIQFALAALVFKEPVTTTELLTFGFIWAGVALY 296



 Score = 39.3 bits (90), Expect = 1e-07
 Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 8/144 (5%)

Query: 12  LGLSAYIIWGLFPIYFKAIASVPSVEIIIHRVLWS-ALFGAALLLVW-KHPGWWRELRDN 69
           + L+    + L+ +  K ++  P   + I  +L S  L G   LL W +  G      D 
Sbjct: 165 ISLTLASTFALYGLIRKTVSVPPLAGLFIEALLLSPVLIG---LLAWIELKGGGLAFFDG 221

Query: 70  P--QRLAILALSGTLIAANWLTYVWAVNNERMLEASLGYYINPLVNVLLGMLILGERLRR 127
           P  + L ++AL G L A     + WA    R+    +  Y NP +   L  L+  E +  
Sbjct: 222 PWGRSLWLMAL-GPLTAVPLFFFTWAARRLRLSTLGVIQYTNPTIQFALAALVFKEPVTT 280

Query: 128 MQWLAVGLAAVGVAQQVWQVGSLP 151
            + L  G    GVA  +W V   P
Sbjct: 281 TELLTFGFIWAGVALYLWPVRKDP 304