Pairwise Alignments

Query, 145 a.a., Putative Holliday junction resolvase YggF from Pseudomonas fluorescens FW300-N2E2

Subject, 141 a.a., conserved hypothetical protein TIGR00250 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  141 bits (355), Expect = 5e-39
 Identities = 68/137 (49%), Positives = 94/137 (68%), Gaps = 1/137 (0%)

Query: 1   MALRLLLGFDYGTKQIGVAVGQVITGQARELCTLKAQNGVPDWNQVEALIKEWKPDAVVV 60
           M  + +LGFD+GTK IGVAVGQ IT  A  L ++KA +G+P+W ++  LI+EW+PD VVV
Sbjct: 1   MNAKTVLGFDFGTKSIGVAVGQQITASATPLLSIKAVDGIPNWEEIAKLIQEWQPDLVVV 60

Query: 61  GLPLNMDGTPSDMCLRAEKFARRLNGRYNLPFYTHDERLTTFEAKGERLVRGGQKGSYRD 120
           GLPLNMDGT  +M  RA KFA RLN ++ +  +T DERLTT +AK      GG K +   
Sbjct: 61  GLPLNMDGTEQEMTHRARKFANRLNAKFGVKIFTQDERLTTTDAKARLFELGGYK-ALTK 119

Query: 121 NPVDAIAAALLLQGWLD 137
             VDA++A L+++ + +
Sbjct: 120 GQVDAVSAVLIIESYFE 136