Pairwise Alignments

Query, 145 a.a., Putative Holliday junction resolvase YggF from Pseudomonas fluorescens FW300-N2E2

Subject, 138 a.a., putative endonuclease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 52.4 bits (124), Expect = 3e-12
 Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 7/136 (5%)

Query: 6   LLGFDYGTKQIGVAVGQVITGQARELCTLKAQNGVPDWNQVEALIKEWKPDAVVVGLPLN 65
           ++  DYG K+ G+AV   +   A  L T+     +   N +   + +   + +++GLP  
Sbjct: 4   IVAIDYGRKRTGIAVSDTLQLIANGLTTVPTHELL---NFIGGYVAKEPVERIIIGLPKQ 60

Query: 66  MDGTPSDMCLRAEKFARRLNGRY-NLPFYTHDERLTTFEAKGERLVRGGQKGSYRDNP-- 122
           M+   S+     E F R L  R+  LP    DER T+  A    ++  G K   R N   
Sbjct: 61  MNNEASENMKNIEPFVRSLKKRFPELPVEYVDERFTSVLAH-RTMLEAGLKKKDRQNKAL 119

Query: 123 VDAIAAALLLQGWLDA 138
           VD I+A ++LQ +L++
Sbjct: 120 VDEISATIILQTYLES 135