Pairwise Alignments

Query, 463 a.a., L-cystine uptake protein TcyP from Pseudomonas fluorescens FW300-N2E2

Subject, 437 a.a., sodium:dicarboxylate symporter family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  205 bits (521), Expect = 3e-57
 Identities = 143/439 (32%), Positives = 233/439 (53%), Gaps = 31/439 (7%)

Query: 29  LARKVLLALVLGVAFGLALHTIYGAGNPVLKASI--GWFDLVGNGYVQLLQMIVIPLVFA 86
           L  K+L+ +  G+ FGL L  ++   +  +K  I  G+  ++G  ++  L+M+V+PLVF 
Sbjct: 11  LTSKILIGMATGIIFGLILRNLF-PDSIFIKDYITDGFLHVIGTIFISSLKMLVVPLVFI 69

Query: 87  SILSAVARLHNASSLGKISFLTIGTLLLTTAIAALIGIGLTNLFGLTAEGLVAGPQELAR 146
           S++     L   S LG++   T+   L TT +A ++ +            ++  P + A 
Sbjct: 70  SLVCGTCSLSEPSKLGRLGGKTLAFYLFTTVLALVLAV---------FAAVIVHPGD-AT 119

Query: 147 LQVIQSDYAGKVADLNVPQLLLSFIPQNPFADLARAKPTSIISVVIFAAFLGVAALQLLK 206
           L   + +Y  K A  +  Q+++  +P NP   ++     +++ ++IFA   G A   L  
Sbjct: 120 LANEKLNYVAKEAP-SFAQVIIDMMPTNPVQAMSEG---NMLQIIIFAVIFGFAIAHL-- 173

Query: 207 DDVEKGQKVINAIDTLQSWVTRLVRLVMKLTPYGVLALMTKVVAGSNLQDIIKLGSFVVV 266
              E+G ++    D L + + R+V LVM+L PYGV ALM K+     L+     GS V  
Sbjct: 174 --GERGNRIAQLFDDLNNVIMRVVTLVMQLAPYGVFALMAKLALTLGLETF---GSVVKY 228

Query: 267 SYLGLGLM----FVVHGLLVSA-AGINPLRFFRKIWPVLTFAFTSRSSAATIPLSIEAQT 321
            +L L L+    FV + +L+ A +G+NPL F RK+  V  FAF++ SS AT+P++IEA  
Sbjct: 229 FFLVLTLLLIHNFVTYSILLKAFSGLNPLIFIRKMRDVQLFAFSTASSNATLPITIEASE 288

Query: 322 SRLGIPRTIASFSASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPVWIATLVAIVTL 381
            RLG+   IASF+   GATI  +G A +   +  V +A   GI  L     A ++   TL
Sbjct: 289 HRLGVDNKIASFTLPLGATINMDGTA-IMQGVATVFIAQVFGIE-LSLTDYAAVIVTATL 346

Query: 382 SSAGVAGVGGGATFAALIVLPAMGLPVALVALLISVEPLIDMGRTALNVSGSITAGAITS 441
           +S G AGV G       +VL  +GLPV  +AL+I V+ L+DM RTA+NV+G   A  I +
Sbjct: 347 ASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDCVATVIIA 406

Query: 442 QVMQQTDKALLNAEEHGEL 460
           +   + ++ + N  + G++
Sbjct: 407 KSEGEFNETVFNNTQAGKI 425