Pairwise Alignments

Query, 451 a.a., Flagellum-specific ATP synthase FliI from Pseudomonas fluorescens FW300-N2E2

Subject, 446 a.a., flagellum-specific ATP synthase (RefSeq) from Shewanella loihica PV-4

 Score =  343 bits (881), Expect = 5e-99
 Identities = 203/434 (46%), Positives = 270/434 (62%), Gaps = 10/434 (2%)

Query: 18  HLRRFAPVM--VRGRVQRVSGILLQCRLPGAQIGDLCRVERDAREPLLAEIVGFDQHDAL 75
           H +  AP M    G++ RV G+ L+     A +G LC +   A + L+AE++GFD     
Sbjct: 15  HTQAVAPFMPEASGQLVRVVGLTLEATGCKAPVGSLCSIATMAGD-LIAEVIGFDDKLLY 73

Query: 76  LSALGGLEGVRVGAAVEPLGMPHRVCVGPQLLGQVLDGFGRPLVDGGAGAFAGAHVPNAS 135
           L  +  L GV  GA V PLG    + VG  LLG+VLDG G P +DG        H    +
Sbjct: 74  LMPIEELSGVMPGAKVTPLGEQTGLNVGMGLLGRVLDGNGAP-IDG----LGQLHTDQKA 128

Query: 136 QVIGEAPAPTARPRIQRPLMTGVRAIDGPLTLGEGQRVGLFAGAGCGKTTLLAEIARNVD 195
                   P AR  I  PL  GVRAI+  LT+G+GQR+GLFAG+G GK+ LL  + R   
Sbjct: 129 TRHATMLNPLARRAISEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTT 188

Query: 196 CDVIVFGLIGERGRELREFLDHELDDELRARAVLVCATSDRSSMERARAAFTATALAEGF 255
            DVIV GL+GERGRE++EF++  L  E R+R+V+V A +D S + R RA  T+T +AE F
Sbjct: 189 ADVIVVGLVGERGREVKEFIEEILGAEGRSRSVVVAAPADTSPLMRLRACETSTRIAEYF 248

Query: 256 RARGQRVLLLIDSLTRFARAQREIGLAAGEPLGRGGLPPSVYSLLPRLVERAGL--TNEG 313
           R  G  VLLL+DSLTR+A+AQREI LA GEP    G PPSV++ LP+LVERAG     +G
Sbjct: 249 RDLGYNVLLLMDSLTRYAQAQREIALAVGEPPATKGYPPSVFAKLPKLVERAGNGGAGQG 308

Query: 314 AITAFYTVLIEQDSMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVLASLSRILANVA 373
           +ITAFYTVL E D + DP+AD  R++LDGHIVLSR LA+ GHYPAIDV AS+SR+   V 
Sbjct: 309 SITAFYTVLTEGDDLQDPIADAARAILDGHIVLSRALADSGHYPAIDVEASISRVAPMVI 368

Query: 374 EAEHLRAGINLRRLLSAYEQIELMLRLGEYQAGADPLTDLAVESRGALDAFLRQDLREPE 433
              HL A   ++++ S Y+Q   ++ +G Y  G+DP  D A+  + A++AFLRQ ++E  
Sbjct: 369 SDAHLEATRRVKQMYSLYQQNRDLISIGAYTQGSDPRIDNAIRLQPAMNAFLRQTMKEAI 428

Query: 434 QLASTLAHLQQLTA 447
              S+   L QL+A
Sbjct: 429 SFDSSALMLGQLSA 442