Pairwise Alignments

Query, 451 a.a., Flagellum-specific ATP synthase FliI from Pseudomonas fluorescens FW300-N2E2

Subject, 445 a.a., flagellum-specific ATP synthase FliI (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  348 bits (892), Expect = e-100
 Identities = 203/421 (48%), Positives = 266/421 (63%), Gaps = 8/421 (1%)

Query: 29  GRVQRVSGILLQCRLPGAQIGDLCRVERDAREPLLAEIVGFDQHDALLSALGGLEGVRVG 88
           G++ RV G+ L+     A +G LC +E    E L+AE+VGFD     L  +  L GV  G
Sbjct: 28  GQLVRVVGLTLEASGCRAPVGSLCSIETMVGE-LIAEVVGFDDELLYLMPIEELRGVLPG 86

Query: 89  AAVEPLGMPHRVCVGPQLLGQVLDGFGRPLVDGGAGAFAGAHVPNASQVIGEAPAPTARP 148
           A V PLG    + VG  LLG+VLDG G PL DG          P  S  I     P +R 
Sbjct: 87  ARVVPLGEQAGLNVGLSLLGRVLDGNGVPL-DGLGALSTEQQAPRHSNAIN----PLSRR 141

Query: 149 RIQRPLMTGVRAIDGPLTLGEGQRVGLFAGAGCGKTTLLAEIARNVDCDVIVFGLIGERG 208
            I  PL  GVRAI+  LT+G+GQR+GLFAG+G GK+ LL  + R    D+IV GL+GERG
Sbjct: 142 AITEPLDVGVRAINAMLTVGKGQRMGLFAGSGVGKSVLLGMMTRGTTADIIVVGLVGERG 201

Query: 209 RELREFLDHELDDELRARAVLVCATSDRSSMERARAAFTATALAEGFRARGQRVLLLIDS 268
           RE++EF++  L ++ RAR+V+V A +D S + R RA  T+T +AE FR  G  VLLL+DS
Sbjct: 202 REVKEFIEEILGEKGRARSVVVAAPADTSPLMRLRACETSTRIAEYFRDLGYNVLLLMDS 261

Query: 269 LTRFARAQREIGLAAGEPLGRGGLPPSVYSLLPRLVERAGL--TNEGAITAFYTVLIEQD 326
           LTR+A+AQREI LA GEP    G PPSV++ LPRLVERAG     +G+ITAFYTVL E D
Sbjct: 262 LTRYAQAQREIALAVGEPPATKGYPPSVFAKLPRLVERAGNGGPGQGSITAFYTVLTEGD 321

Query: 327 SMNDPVADEVRSLLDGHIVLSRKLAERGHYPAIDVLASLSRILANVAEAEHLRAGINLRR 386
              DP+AD  R++LDGHIVLSR LA+ GHYPAID+ AS+SR+   V   EHL A   +++
Sbjct: 322 DQQDPIADASRAILDGHIVLSRSLADSGHYPAIDIEASISRVAPMVISNEHLEAMRRVKQ 381

Query: 387 LLSAYEQIELMLRLGEYQAGADPLTDLAVESRGALDAFLRQDLREPEQLASTLAHLQQLT 446
             S Y+Q + ++ +G Y  G+DP  D A+  + A++AFLRQ +R+    A +   L QL 
Sbjct: 382 TYSLYQQNKDLISIGAYAQGSDPRIDNAIRLQPAMNAFLRQTMRDAFSFADSQVMLGQLA 441

Query: 447 A 447
           A
Sbjct: 442 A 442