Pairwise Alignments

Query, 183 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas fluorescens FW300-N2E2

Subject, 199 a.a., RNA polymerase sigma factor RpoE from Dechlorosoma suillum PS

 Score = 73.6 bits (179), Expect = 2e-18
 Identities = 47/152 (30%), Positives = 83/152 (54%), Gaps = 7/152 (4%)

Query: 27  ERKLRLFVQKRVLNQDDADDIIQLTYLEAWRNQQKFKGLAKQDTWLCGIALNLIRNHFRR 86
           +RKL   + + + +  + +D+ Q  +++A+R    F+G +   TWL  I +N  +N+   
Sbjct: 30  QRKLGRLLSRFIRDPAEVEDVAQEAFIKAYRALPSFRGDSAFYTWLYRIGINTAKNYLVA 89

Query: 87  FYAQPPLSTFDESEFSESSDD------IDLSE-LCDNRRLLDRTLLAMDELPKDMRDTLW 139
              + P ST  +SE +E+ DD      I+  E L  ++++ +    AMD LP+++R  + 
Sbjct: 90  QGRRAPTSTEFDSEEAETFDDGEQLRDINTPENLLLSKQIGETVNAAMDALPEELRTAIM 149

Query: 140 TAVDTESSYRDAAERLGVPIGTVRSRLFRARE 171
                  SY + A+ +  PIGT+RSR+FRARE
Sbjct: 150 LRELEGLSYEEIAKIMDCPIGTIRSRIFRARE 181