Pairwise Alignments

Query, 466 a.a., TPR domain protein from Pseudomonas fluorescens FW300-N2E2

Subject, 466 a.a., TPR domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  147 bits (370), Expect = 1e-39
 Identities = 112/440 (25%), Positives = 199/440 (45%), Gaps = 54/440 (12%)

Query: 8   VFSIALGAITLLSGC---SAFRNYDSELAQTNQQLASGNVDAALTLLEKNNTSQDKDLLY 64
           + ++ L AI   SGC   S F NY +++A   Q+L +    A +  L  N    D  LLY
Sbjct: 14  ISTLMLAAILGSSGCAYNSIFINYPAQIAPVKQELNTAKPMAEIDKLASNIQGND-GLLY 72

Query: 65  YFEKGELLRAKGDLSGSQTAWNSADQQVGQWEDAVKLDTAKYLAQFGSFLVNDKVRRYEG 124
             E G + +  GD + S+  +  A      ++D  K+  +   A   S ++ND    Y G
Sbjct: 73  AQEAGRVAQVAGDFASSKKYYQQAVAAYTAFDDKAKISASDIGATATSLVLNDNAIPYRG 132

Query: 125 YDYEKVMLTTQMALNLLAVNDFDGARTQIKKTHEREAVIADLRDKEYLKREEEAEKQGIK 184
             YE++ML    ALN L   D+ GA  ++++++E ++                +E++  +
Sbjct: 133 PGYERIMLHQYQALNYLFSGDYQGALVEVRRSNELQS----------------SEQERYQ 176

Query: 185 TEYKDLQGYPVASLDA------PEVVSLKNSYQSAFSHYLAGFVYEALGEKDLAAPGYRK 238
              K +Q     ++DA          ++ +S+ +A+S+Y  G ++E LGE + A   YRK
Sbjct: 177 KSQKSVQAMANGTIDAEVNRLGQAAGTVTSSFLNAYSYYTTGVLHEVLGEPNDAFIDYRK 236

Query: 239 AAELRPNTPLLEQALRDL-----------------DKPAAKSDDSDILIVVQSGLAPSRD 281
           AA++ P+   L+Q L  L                 D    K+ +  ++++V+ G  P + 
Sbjct: 237 AAQITPDNTYLQQDLVRLAKQLGMPQYDEFKKRWGDAKLPKAGEGQVILMVEKGFVPEKQ 296

Query: 282 SIRIPLPLPISGNLVITPLSFPLIKPDTSTATFGQIGVDGRQLDLTQLNSTTAMSRRALR 341
           ++ +  P  I GN     +S     P+ S     Q+   G  L    + +  A++  AL+
Sbjct: 297 ALTV--PFTIHGNW--QTVSLATYGPNNSYVPETQVQGLGTVLKTEPIANIDALAITALK 352

Query: 342 DDMPGIILRTTVRAVTRGVAQKQI-------NDTNPLAGLAVGLTSAVLEGADTRTWRTL 394
           +D+PG ++R   R   +     Q+       N+   +  +A+ + + V E AD R+W TL
Sbjct: 353 EDLPGTLVRQVARVYAKSEMAYQVEKSGKPGNNAADIGSIAMQIFNVVTEQADRRSWLTL 412

Query: 395 PDYTQVVRLRLKKGEHQVTL 414
           P   Q+ R  L  GE+ + L
Sbjct: 413 PKQAQIGRRYLNPGEYTLQL 432