Pairwise Alignments

Query, 238 a.a., ABC transporter, ATP-binding protein from Pseudomonas fluorescens FW300-N2E2

Subject, 223 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  109 bits (273), Expect = 4e-29
 Identities = 81/205 (39%), Positives = 111/205 (54%), Gaps = 10/205 (4%)

Query: 7   VHKSRGAGSQRYSLV-IPRLHLRGGEQLAVVGPSGCGKSTLLDLLALVLAPDQAGRFDFT 65
           V KS   G QR++++    L L  GE +A+ GPSG GKSTLL+L+A     D +G+    
Sbjct: 10  VSKSFRDGEQRHTVLQAVDLTLHQGETIALTGPSGSGKSTLLNLIAGFETVD-SGQIVLN 68

Query: 66  PANTPLDIAKLWRGSQQGTLAELRSRHLGYVLQTGGLLGFLDVRGNIELSRKLLGLKDDG 125
             +T     + W        +E R  HLG V Q   LL  L+V+ NI  S  L G   + 
Sbjct: 69  HQSTTKWQDRQW--------SEFRRTHLGVVFQQFNLLTPLNVKNNIGFSLYLNGDSWNP 120

Query: 126 SVTRLAGQLDIADQLDKKLADLSVGQRQRVSCARALAHGPRLLLADEPTAALDPLNAERV 185
               L  +L +A  L++++  LS GQ+QRV+ ARALAH P LLLADEPT  LD  + ++V
Sbjct: 121 WCDYLVEKLGLAALLNRQVEALSGGQQQRVAIARALAHNPSLLLADEPTGNLDDESGKQV 180

Query: 186 MQLLVAQAREHGVCCVVATHDETLA 210
           M LL   A+E     ++ TH E  A
Sbjct: 181 MSLLCELAKESQTSILMVTHSEECA 205