Pairwise Alignments

Query, 643 a.a., VgrG-3 protein from Pseudomonas fluorescens FW300-N2E2

Subject, 1163 a.a., type VI secretion system tip protein VgrG from Vibrio cholerae E7946 ATCC 55056

 Score =  323 bits (828), Expect = 3e-92
 Identities = 201/638 (31%), Positives = 321/638 (50%), Gaps = 29/638 (4%)

Query: 16  LGPEVLLLKDMGGGEELGRL---------FNYELQLHSLDNAIDLNQLLGKPMCVSLQLD 66
           L  E L+++   G E L            F YE+QL S  + +   Q++ K   + L  +
Sbjct: 13  LEDETLVVRGFHGQESLSNSVFLGQACYGFRYEVQLASRVSNLTAEQMVDKRAELKLYRN 72

Query: 67  GGGERYFHGIVARCSQNVDQGQFASYQATLRPWLWLLTRTSDCRIFQNLTIPQIIKQVFR 126
               +  HGIV   SQ         YQ TL P L  L+   + RIFQ  T+P+I+  + +
Sbjct: 73  SQLVQRVHGIVRAFSQGDIGHHHTFYQLTLVPALERLSLRHNSRIFQKQTVPEILSILLQ 132

Query: 127 DLGFSDFEDALSRPYREWEYCVQYRETSFDFVSRLMEQEGIYYFFRHEQGRHVLVLADAY 186
           ++G +D+  AL R   + E+CVQYRE+  DF+ RL  +EG+ Y F HE G+H L  +DA 
Sbjct: 133 EMGINDYAFALKRDGVQREFCVQYRESDIDFLHRLAAEEGLVYSFVHEAGKHTLYFSDAS 192

Query: 187 GAHTTAPGYGSVPYYPKNEQQRERDHIHDWHLAQEVQPGSLELNDYDFQRPS-ARIDVRS 245
            + +  P    +PY        +  +IH      + +   ++L DY F++P+ + +    
Sbjct: 193 DSLSKLPE--PIPYNALVGGAIDTPYIHGLTYRTQAEVSEVQLKDYSFKKPAYSFLQTVQ 250

Query: 246 AMPRPHTAGDYPLYDYPGTYVQSTDGEHYARTRIEALQSLHEQVELAGNARGLGSGHLFS 305
                +    Y  +D PG Y    +G  +++ R++ L+          N   L +G+ F 
Sbjct: 251 GTELDYQQTRYQHFDAPGRYKDDVNGAAFSQIRLDYLRRHAHTATGQSNEPLLRAGYKFD 310

Query: 306 LTGFSRQDQNREYLIVGARYYISQESG-ETGGGAPTAQFESSLTCIDAQQSYRPLATTHR 364
           L        NR++++V   +   Q    +  GG+    + +  + I     +R      +
Sbjct: 311 LQEHLDPAMNRDWVVVSINHQGEQPQALQEDGGSGATTYSNQFSLIPGHLHWRA-EPQPK 369

Query: 365 PIVKGPQTALVVGPKGEEIWTDQFGRVKVHFYWDRHDQSNENSSCWIRVSQSWAGKNWGS 424
           P V GP  A VVGP+GEEI+ D+ GRVK+HF WDR+   NE SSCW+RVSQ WAG  +G 
Sbjct: 370 PQVDGPMIATVVGPEGEEIFCDEHGRVKIHFPWDRYSNGNEQSSCWVRVSQGWAGSQYGF 429

Query: 425 MQIPRIGQEVIVSFLEGDPDRPIITGRVYNAEQTVPYDLPENATQSGMKSRSSKGGTPAN 484
           + IPRIG EVIV FL GDPD+PIITGR Y+A  T PY LPE+ T++ +++ + +G     
Sbjct: 430 IAIPRIGHEVIVEFLNGDPDQPIITGRTYHATNTPPYTLPEHKTKTVLRTETHQG---EG 486

Query: 485 FNEIRMEDKKGAEQLYIHAERNQDIVVEVDESHSVGHDRN--------KSIGHNETVTIG 536
           FNE+  ED+ G EQ+Y+HA+++ D ++E D +  + HD +          I HN+ +T+ 
Sbjct: 487 FNELSFEDQAGKEQIYLHAQKDFDGLIENDHTTVIRHDHHLTVENDQFTQIKHNQHLTVE 546

Query: 537 NNRLRIVKQEDILSVGQRKTDSISQSYVIEVGENLRLVCGESILELNASGQINLSGVQIS 596
                 V  E +LS+         + +V E G  + +  G+ ++ + A  +I +      
Sbjct: 547 WESREAVTGEQVLSIEGSLHVKTGKVWVNEAGTEIHVKAGQKVV-IEAGSEITVKAGGSF 605

Query: 597 FYASGDAEFNTGGVLHLNNGGGPGATPDGQGVKGSIDA 634
                     +G +++LN+GG  G+   G G  G++ A
Sbjct: 606 VKVDPAGVHLSGALVNLNSGGSAGS---GSGFGGAMPA 640