Pairwise Alignments

Query, 1147 a.a., IcmF-related protein from Pseudomonas fluorescens FW300-N2E2

Subject, 1189 a.a., type VI secretion system protein ImpL from Paraburkholderia graminis OAS925

 Score =  386 bits (992), Expect = e-111
 Identities = 350/1209 (28%), Positives = 523/1209 (43%), Gaps = 102/1209 (8%)

Query: 11   WGRQTWIWTLLAVLCIALLVWFAGPLLAVNDYKFWASPTARLLTVSVLLLGWGLAMVFVS 70
            W +  W    L +L IA L+W  GP + + + +  AS  AR+  +  ++L W +A+  + 
Sbjct: 7    WVKSRWFTHALGLLLIAALIWLGGPYVGIGEREPLASAAARVALILAVVLAWVIALQVLQ 66

Query: 71   GRGGSST-NLQQNAPEQARALHLARIEDEQR-EVRSRFKQALSTLRSSSLYPGRSERWRN 128
             R    T  L  +   Q   L  A    E+R ++  RF++A+ TLR +     R+     
Sbjct: 67   WRAQRKTARLSGDLAGQETQLAAAEPGSEERAQLLQRFREAIHTLRKTR----RNGNNLY 122

Query: 129  DLPWYLMIGPPASGKTRLLDRSGLEFPLN-KLERKPIGDTSGTRYCDWYFAEHAVLVDTA 187
             LPWY++IGPP SGK+ LL  SGL+FPL+ +  +  +    GTR CDW+F + AV +DTA
Sbjct: 123  ALPWYVVIGPPGSGKSTLLQNSGLDFPLSERFGKDALRGIGGTRNCDWWFTDEAVFLDTA 182

Query: 188  GRYLTQ-TDSDVDSSVWAVLLELLRKRRRSRPLNGVLVTVPTEVLLLGSEDEVTTLARQI 246
            GRY TQ +D+  D+S W   L LLR+ RR RPLNGV+VT+    LL   +      AR +
Sbjct: 183  GRYTTQDSDAQADASAWQSFLALLRRYRRRRPLNGVIVTMSVSDLLGFDDAAREQHARAV 242

Query: 247  RGRLQELQQRLHVDVPVYLVLSKADNVPGFNEFFDSLTREENDQVLGASF--SRDQRGCD 304
            R RL EL Q L V VPVYLV +K D V GF EFFD L  +   QV G +F       G  
Sbjct: 243  RRRLDELAQHLKVAVPVYLVFTKCDLVAGFGEFFDDLGAQLRSQVWGVTFPLGASLDGSA 302

Query: 305  VAVLRAEFEALLHRLNSQVIMRMHQERDPLRRSCMLDFPHQLGQLGTSLCLLVEQAF--- 361
             +    E++ LL+RLN+++I R+H ERD  RR+ +L FP QLG         VE AF   
Sbjct: 303  SSRFADEYDLLLNRLNTRLIERLHGERDRGRRASVLSFPQQLGAFREIARQFVEAAFGRH 362

Query: 362  -TGSVGTLRGFYLTSASSSG-------------------RTNTAPGGR-SRFIKHLISRV 400
              G+   LRG YL+S +  G                   R     G R + F++ L+  V
Sbjct: 363  QYGTPPMLRGAYLSSGTQEGAPIDRILGAVARTFGVDAARVQAGAGQRHTYFVERLLKDV 422

Query: 401  IFPEADLTDLVQRERRRLHWGQRVMYFGALTVIGLCGLLWAHGFSANHERLDSLRTLTQ- 459
            +F E+ L     R  R+  + Q   Y G   V     L+   GF+ ++ R  +     Q 
Sbjct: 423  LFRESGLAGTNPRFERQKLFMQAAAYAGLAVVT----LVLVAGFATSYARNRAFVAEVQG 478

Query: 460  --RWDQQQSVQANADDWTSMLESLDIRFE---ATQ-VFPPYRA-VPLHERVGLYQGEASN 512
              +     +  A A D  S       R E   ATQ     YRA VP   R GLYQG A  
Sbjct: 479  ALKDLPDATTLAGAPDLKSYFARALARLEVISATQDAAGQYRAHVPWSMRFGLYQGNALF 538

Query: 513  PAVTNAYERDLQGRLLPKVAQRLEAHVRNNWNDREQLLNSLRAYLMLGLQERRDVAWLKD 572
                +AY R+L G LLP V  R    +  N ++ + L + L+ YLMLG  +  D   L  
Sbjct: 539  AQAHSAYLRELDGTLLPGVDLRFREGLVENASNPQALYDDLKGYLMLGEPQHLDADELAA 598

Query: 573  WLANDGSLRYPGNTALQEGLNAHLERLL---ELPFIHALNEPLVAQAREALRRESLATVV 629
                +    +P + A++  L+ H    L   + P    L+  L+AQAR  L+   +AT++
Sbjct: 599  LARVEWQRLFPQDPAIRTALDKHFSARLGDAQKPRALPLDNALIAQARSTLKTADVATMI 658

Query: 630  YRMLHEQA--SHLPQYRLSQHLGSQGALL-----VGTDRVIPGFYTRQGYERYFSVQGAA 682
            Y  +   A  S     RL Q LG  G +            +P  +TR  ++   S     
Sbjct: 659  YGSVQLDAGRSGASPVRLDQSLGLLGNVFRRKSGAPLSEPLPVLFTRPYFQSEVSGGLDQ 718

Query: 683  LVTELLRDNWVLGEGEGLSRMDMRRLMVELEQLYFRDYADHWSEAVGQVALQTISNAGEG 742
             V   ++D WV   G  +  +   R   ++  LY +DY  +W   +  + LQ +++  + 
Sbjct: 719  SVDRFVKDYWVFDSGR-VDPLARSRYEQQVLTLYEQDYIRNWDALLADLQLQPVTSIQDA 777

Query: 743  AEQLAGLTSAHSPILRMLVQVRDHTR------IQAVAEQIDDLTRAAGNAGHAV------ 790
            +   A L+   SP+  +L  VRD+T           A   D L   A  AG  +      
Sbjct: 778  SAMAAKLSGPSSPLKALLNLVRDNTSDMLRAPASGAAAGADSLASQARLAGENIAAKRAL 837

Query: 791  -TKLSAVAGKASASLAENLPDTA-----------QKSLRRRFEPLHRL-LDPDNGPTADL 837
             T+L+     A A L   +   A             ++   F  + +L           L
Sbjct: 838  NTRLAGELRNAGAPLPVGVTLKAGDANPAGSRQPGAAIEEHFAQIDQLGTGAGTSGATPL 897

Query: 838  VQALRAVDEVQLQLANLARASAPEQAAFELARHRMGGQRDALSHLRGASARLPRPLSAWF 897
               L  +D++   L  +   S P                 AL   R  + +LP  ++   
Sbjct: 898  DHTLAVLDQLGKTLLTMNDLSDP-----------AAQNSPALLAARQEAGQLPPQVAGLI 946

Query: 898  NVMAEDSWRLVLNDSYRYLNQRYQSELYSFYGKAINKRYPFSAHSASDVALNDFREFFKD 957
              +   S  LV +     L  ++++   S     ++ RYPF+A   SD+ L +F E F +
Sbjct: 947  QGLTGKSADLVASGGSAALADQFRAAAGSDCANFVDGRYPFAASGGSDIPLQNFAELFGN 1006

Query: 958  QGIVDRFFDNYLQPFISGSAGHYRLRSIEGQSLPMSRVYLDQMATAHTIRRSFFAENPTE 1017
             G  D FF + L   +      +R +     + P  +  L     A  IR+ FF  +  +
Sbjct: 1007 GGRFDSFFKSTLAQRVDTGGRAWRWKP---GAPPGPQSVLAGAQAADDIRQMFF-RSGAQ 1062

Query: 1018 PQVQFKLEPYTLDPAVSRAEFRFGDQMLEYRHGPILPVAFTWPSDAQNGRTALVLDKMVG 1077
             QV F L     +  ++RA      Q  +Y       VA  WP   Q G  ++    + G
Sbjct: 1063 VQVGFTLLAPQFEAPIARAVIEIDGQKYDYSANGASSVAMAWPG-PQPGHVSVSAFDVAG 1121

Query: 1078 RGVGIE-KNTGPWSLFRLFDLMQSEYLTGRDVRVLKA-DLGGLRANYLLTSQRTPNPFDM 1135
            R +G   +  G W+ F   D  + +     D+R L   D  G      +      NPFD 
Sbjct: 1122 RPLGTPLRFDGEWAFFHALDAARLQ--KQGDLRYLATFDFDGHALKLPIQPASLRNPFDS 1179

Query: 1136 SVLRTFRLP 1144
            + +R FR P
Sbjct: 1180 NEVRRFRCP 1188