Pairwise Alignments

Query, 265 a.a., Amino acid ABC transporter, permease protein from Pseudomonas fluorescens FW300-N2E2

Subject, 218 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  164 bits (415), Expect = 1e-45
 Identities = 94/221 (42%), Positives = 136/221 (61%), Gaps = 10/221 (4%)

Query: 36  LKFSIILDKLPNLLGVHLAPNGFLQGAVLTLFLCLCSIVASSLLGFITALARLSSSAVAF 95
           +KF +IL  LP LL          +GA  T+ + L  I+   ++G +  + RLS + +  
Sbjct: 1   MKFQVILANLPFLL----------KGAGSTIAISLVGILLGQVIGALVCVGRLSGNRLID 50

Query: 96  GIASFYASFFRGTPLLIQILLIYLGLPQLGVVPGAIAAGIIALSLNYGAYLSEIFRAGIL 155
            I + Y SFFRG PLLIQ+LLIY  LP +G+   A+ A I AL L  GAY+SEI+R  + 
Sbjct: 51  AIGALYVSFFRGVPLLIQLLLIYYMLPLIGIDVPALMAAIGALGLASGAYVSEIYRGSLN 110

Query: 156 GVPHGQREASLALGLSETVIFWRVTLPQAMRTIIPPTTNQFISMLKDSSLISVMGVWEVM 215
            +P GQ EA+LALG S   I+ R+ LPQA R  +P   N+ I +LK SSLISV+GV E+ 
Sbjct: 111 AIPRGQGEAALALGFSGGSIWRRILLPQAFRLSVPALVNELILLLKASSLISVIGVAELT 170

Query: 216 FLAQSYGRSSYRYIEMLTTAAIIYWLMSIALELIQARMERH 256
            ++Q+   S+YR +E+   A +IY+L++  L ++ A +ERH
Sbjct: 171 RVSQTVSASTYRALEIYMAAGVIYFLINGCLAILGALVERH 211