Pairwise Alignments

Query, 946 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

Subject, 999 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  432 bits (1110), Expect = e-125
 Identities = 238/584 (40%), Positives = 359/584 (61%), Gaps = 9/584 (1%)

Query: 360 RAVERSVSGRVLRMVGTRRDISTSKELEQQRQLAATVFEAASEGIVIFDPHYVLLAANQA 419
           RA     +G+V  + G   DIS+  E E++R+L   VF+ + E I+I D    ++  N A
Sbjct: 418 RAPVFDAAGQVRALAGVAWDISSRYEAEERRRLITHVFDHSIEAILILDATGHIVTFNNA 477

Query: 420 FTRVTGFNIDDMLGR--NVVDLPCSRDARRHYPVIRQALKQHGTWQGELVEARANGELYP 477
           F  ++G+ +++  G+  + +  PC+    R    IR  L +   W GE +  R +G   P
Sbjct: 478 FAELSGYTVEESAGQQPDFLASPCNEPDFRAQ--IRATLDRGENWLGEAIARRKDGSDCP 535

Query: 478 QWLQLNVVRNARGNVSHIVGFFADLSARRESEERMRYLTHYDELTGLANRSLFRERLHEA 537
            W  +  + N +G + + V F  DLS ++ ++ ++  L++ D+LT L NR  F   L E 
Sbjct: 536 VWCNIGAIVNEQGAIVNKVAFVTDLSEKKAAQAQIETLSNVDQLTTLPNRQWFSRILGEW 595

Query: 538 HQRVRQGGRRSLALLHINLDRFKLLNDSLGHDIADQLLQKMARRLINALPEADTIARLSG 597
            Q   QG     AL+ ++LD+   +ND+ GH   D+LL+++  RL   L   D + RL G
Sbjct: 596 LQEGCQG-----ALVLLDLDQLSRVNDAFGHAAGDELLRRVGERLRKGLRPHDILGRLGG 650

Query: 598 DEFAVLFDAYGNLSSLARVATRLAAKLRVPLTIEGHELVLSASIGISLLPDNTREVAMLV 657
           D+F +L D   +  S+A V   L   L  P+ ++G ++V +A  GI+L P +  +VA+L+
Sbjct: 651 DQFGILIDGRDDSRSVATVVRHLLDILAHPIQMQGSDVVTTACAGITLFPQDGNDVALLL 710

Query: 658 SQANMAMQHAKHLGGNNFQFYTDSLQASTLERLQLENQLRKALEEQQLKVFYQPKLCLAT 717
              + AM HAK+   N++ F+   +    +ERL+LE++LR AL+  QL++ YQP++ + +
Sbjct: 711 RNVDTAMHHAKNSNLNSYHFFAPEMNQRVVERLRLESELRLALQLDQLELHYQPQVEIGS 770

Query: 718 GRLNAAEALVRWDHPAMGRVPPGDFIGLAEETGLIGPIGEFVLRQACWQACEWQRQGLAP 777
           G++N  EAL+RW+HP +G V P DFI LAEET LI PIG +VL++AC Q  +WQ QGL P
Sbjct: 771 GQINGFEALLRWNHPELGMVSPADFIPLAEETRLILPIGAWVLKEACRQNRQWQDQGLPP 830

Query: 778 IRVSVNLSVHQLRQGKLVSLVRQVLEETGLAPQYLELELTESQLLDSVEHIIATFQQLRD 837
           + V+VNLS  Q ++  LV++V   L  +GLAP++LELE+TES ++   E ++   ++L+ 
Sbjct: 831 MVVAVNLSALQFQESDLVAMVSAALMTSGLAPRWLELEITESVIMQEPERMVGILEELKC 890

Query: 838 LGVKLAIDDFGTGYSSLSYLKRIPVDYVKIDQAFIRGLGEGSVDAAITRAIIAMAHGLSL 897
           LGV+L+IDDFGTGYSSLSYLKR P+D +KID++FIR +     DAAI R +IAMA  L  
Sbjct: 891 LGVRLSIDDFGTGYSSLSYLKRFPIDKIKIDRSFIRDVVSSQGDAAIVRMVIAMAGELER 950

Query: 898 KVVAEGVERQEQLEFLRSERCDEVQGYLVSRPVEAEGLAGLLRA 941
           KV+AEGVE  EQL+FLR  +C E QG+L SRPV A  +  LL A
Sbjct: 951 KVIAEGVETNEQLDFLRLHQCHEFQGFLCSRPVPALQVPELLAA 994