Pairwise Alignments

Query, 258 a.a., Transcriptional regulator of glmS gene, DeoR family from Pseudomonas fluorescens FW300-N2E2

Subject, 256 a.a., DeoR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  353 bits (906), Expect = e-102
 Identities = 178/256 (69%), Positives = 211/256 (82%)

Query: 1   MSKRNTPQRRHNILALLQEQGEVSVDELAKRFETSEVTIRKDLAALETNGLLLRRYGGAV 60
           M+KRNT QRRH+I+A+L E GEVSVDELA RFETSEVTIRKDLA LE  GLLLRRYGGAV
Sbjct: 1   MNKRNTQQRRHSIIAVLNETGEVSVDELANRFETSEVTIRKDLAVLEKTGLLLRRYGGAV 60

Query: 61  PMPQELVADNGQTVSKYKLAIARAAVKRIREHARIIIDSGSTTAAMIPQLGQQPGLVVMT 120
            +P E+       ++  KL+IA AA + I++H RIIIDSGSTT+ ++ QL  + GLVVMT
Sbjct: 61  AIPDEVTQQFSAKIAPNKLSIAEAAARLIKDHNRIIIDSGSTTSGLVQQLNTKRGLVVMT 120

Query: 121 NSLHVANALSELEHEPVLLMTGGTWDPHSESFQGQVAEQVLRSYDFDQLFIGADGIDLVR 180
           NSL +ANA+ ELE+EP LLMTGGTWDPHSESFQGQVAEQVLRSY+FDQLFIGADGIDL R
Sbjct: 121 NSLQLANAIHELENEPTLLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLAR 180

Query: 181 GTTTFNELLGLSRVMAEVAREVIVMVEADKIGRKIPNLELPWSSVHTLITDDRLPVEARD 240
           GTTTFNEL GLS+VMAEV+REVIVMV++DKIGR+IPNLELPW  +  L+TDDR+  +  +
Sbjct: 181 GTTTFNELTGLSKVMAEVSREVIVMVDSDKIGRRIPNLELPWQQISVLVTDDRVDEQTVE 240

Query: 241 QIQARGITVICAPVSQ 256
           QI  +G+ VI AP S+
Sbjct: 241 QIIEQGVEVILAPYSK 256