Pairwise Alignments

Query, 514 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Pseudomonas fluorescens FW300-N2E2

Subject, 509 a.a., F0F1 ATP synthase subunit alpha from Sinorhizobium meliloti 1021

 Score =  563 bits (1450), Expect = e-165
 Identities = 289/513 (56%), Positives = 375/513 (73%), Gaps = 19/513 (3%)

Query: 4   LNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLADVMYGEMIEFPGGVYGM 63
           +  +EIS I+K +I      ++    G V+SV DGI R++GL +V  GEM+EFPGG+ GM
Sbjct: 3   IRAAEISAILKDQIKNFGQEAEVSEVGQVLSVGDGIARVYGLDNVQAGEMVEFPGGIRGM 62

Query: 64  ALNLEQDSVGAVVLGAYTSLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDGKGPLN 123
           ALNLE D+VG V+ G+   + EG + K TG I++VPVG ELLGRVVDALGNP+DGKGP+N
Sbjct: 63  ALNLEADNVGVVIFGSDRDIKEGDTVKRTGAIVDVPVGPELLGRVVDALGNPIDGKGPIN 122

Query: 124 NTETDAVEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKTALAIDA 183
             +   V+  APG+I RKSV +P+ TG KA+DA+IPVGRGQREL+IGDRQ GKTA+ +D 
Sbjct: 123 AKQRARVDVKAPGIIPRKSVHEPMSTGLKAIDALIPVGRGQRELVIGDRQTGKTAIILDT 182

Query: 184 IINQK--------NSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIIVAASASESPAL 235
           I+NQK           ++CVYVAIGQK+ST+A  V+ LEE GAL  +IIVAA+AS+   +
Sbjct: 183 ILNQKAIHDNGPEGDKLYCVYVAIGQKRSTVAQFVKVLEERGALQYSIIVAATASDPAPM 242

Query: 236 QFLAPYSGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLH 295
           Q+LAP++GC MGE+FRD G+ ALI YDDLSKQAVAYRQ+SLLLRRPPGREAYPGDVFYLH
Sbjct: 243 QYLAPFAGCAMGEYFRDNGKHALIGYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLH 302

Query: 296 SRLLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIF 355
           SRLLERA+++S+E       GA     GSLTALP+IETQ  DVSAF+PTNVISITDGQIF
Sbjct: 303 SRLLERAAKLSDE------RGA-----GSLTALPVIETQGNDVSAFIPTNVISITDGQIF 351

Query: 356 LESAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLD 415
           LE+ +F  GIRPAVN G+SVSRVG +AQ K +K+++G I+  LAQYRE+AAFAQF SDLD
Sbjct: 352 LETDLFYQGIRPAVNVGLSVSRVGSSAQIKAMKQVAGSIKGELAQYREMAAFAQFGSDLD 411

Query: 416 EATRKQLEHGQRVTELMKQKQYAPMSIADMALSLYAAERGFLTDVEIAKVGSFEQALIAY 475
            AT++ L  G R+TEL+KQ Q++P+   +    ++A   G+L  + ++ VG FE  L++Y
Sbjct: 412 AATQRLLNRGARLTELLKQPQFSPLKTEEQVAVIFAGVNGYLDKLPVSDVGKFEHGLLSY 471

Query: 476 FNRDHADLLAKINVKGDFNDEIDAGMKAGIEKF 508
              +   +L  I  +   +D+  A +K  I+ F
Sbjct: 472 LRSEGKAVLDTIRTEKAISDDTKAKLKGAIDSF 504