Pairwise Alignments

Query, 514 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Pseudomonas fluorescens FW300-N2E2

Subject, 513 a.a., F0F1 ATP synthase subunit alpha (RefSeq) from Shewanella amazonensis SB2B

 Score =  803 bits (2073), Expect = 0.0
 Identities = 403/512 (78%), Positives = 460/512 (89%)

Query: 3   QLNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLADVMYGEMIEFPGGVYG 62
           QLN +EIS++IK RI++ DV S+ARNEGT+V+VSDGI+R+HGLADVM GEMIE PG  Y 
Sbjct: 2   QLNSTEISDLIKQRIEQFDVVSEARNEGTIVAVSDGIIRVHGLADVMQGEMIELPGNRYA 61

Query: 63  MALNLEQDSVGAVVLGAYTSLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDGKGPL 122
           +ALNLE+DSVGAVV+G Y  LAEG+  K TGRILEVPVG+ LLGRVV+ LG P+DGKGP+
Sbjct: 62  IALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKGPI 121

Query: 123 NNTETDAVEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKTALAID 182
           +N     VE +APGVI RKSV QPVQTGYKAVD+MIP+GRGQRELIIGDRQ GKTA+AID
Sbjct: 122 DNDGFAPVEVIAPGVIDRKSVSQPVQTGYKAVDSMIPIGRGQRELIIGDRQTGKTAMAID 181

Query: 183 AIINQKNSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIIVAASASESPALQFLAPYS 242
           AIINQ++SGI CVYVA+GQK STIANVVRKLEE+GALANT++V ASASE+ ALQFLAPYS
Sbjct: 182 AIINQRDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTVVVVASASEAAALQFLAPYS 241

Query: 243 GCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERA 302
           GCTMGE+FRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERA
Sbjct: 242 GCTMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERA 301

Query: 303 SRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMFN 362
           SRV+EEYVEKFT GAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLE+ +FN
Sbjct: 302 SRVNEEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETNLFN 361

Query: 363 SGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQL 422
           SG+RPAVN G+SVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAF+QFASDLD+ATR QL
Sbjct: 362 SGLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDDATRAQL 421

Query: 423 EHGQRVTELMKQKQYAPMSIADMALSLYAAERGFLTDVEIAKVGSFEQALIAYFNRDHAD 482
           EHG+RVTELMKQKQYAPMS+A+ A+ ++AAE+GFL  + + KVG FE AL+A+ N +HA+
Sbjct: 422 EHGERVTELMKQKQYAPMSVAEQAVVIFAAEKGFLKGIALKKVGDFEAALLAFMNAEHAN 481

Query: 483 LLAKINVKGDFNDEIDAGMKAGIEKFKATQTW 514
           L+  IN  GD+N EI+A +KAG++KF ATQTW
Sbjct: 482 LMKLINDTGDYNAEIEAELKAGLDKFVATQTW 513