Pairwise Alignments

Query, 514 a.a., ATP synthase alpha chain (EC 3.6.3.14) from Pseudomonas fluorescens FW300-N2E2

Subject, 502 a.a., F0F1 ATP synthase subunit alpha (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  566 bits (1458), Expect = e-166
 Identities = 288/507 (56%), Positives = 376/507 (74%), Gaps = 11/507 (2%)

Query: 3   QLNPSEISEIIKGRIDKLDVTSQARNEGTVVSVSDGIVRIHGLADVMYGEMIEFPGGVYG 62
           Q+   EIS+II+ +I   +   +    GTV+SV DGI R++G+ + M  E++EFPGG+ G
Sbjct: 2   QIKAEEISKIIEEQIQSYEQRVEMSETGTVLSVGDGIARVYGVRNAMAMELLEFPGGLMG 61

Query: 63  MALNLEQDSVGAVVLGAYTSLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPVDGKGPL 122
           M LNLE+D+VG  +LG  T + EG   K TG+I  VPVG E++GRV++ LG P+DG GPL
Sbjct: 62  MVLNLEEDNVGVALLGEDTGIKEGDPVKRTGKIFSVPVGDEVMGRVLNPLGQPIDGLGPL 121

Query: 123 NNTETDAVEKVAPGVIWRKSVDQPVQTGYKAVDAMIPVGRGQRELIIGDRQIGKTALAID 182
              E   VE  APG+I RKSV QP+ TG KA+DAM P+GRGQRELIIGDRQ GKTA+ ID
Sbjct: 122 EAKEFRPVELKAPGIIARKSVHQPMPTGIKAIDAMTPIGRGQRELIIGDRQTGKTAVCID 181

Query: 183 AIINQKNSGIFCVYVAIGQKQSTIANVVRKLEENGALANTIIVAASASESPALQFLAPYS 242
           AI+ Q+++GI C YVAIGQK++T+A V   L ++GA+  T I++A+ASE   LQF++ YS
Sbjct: 182 AILAQRDTGIRCFYVAIGQKKATVALVADTLRKHGAMEYTTIISATASEPAPLQFISAYS 241

Query: 243 GCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERA 302
           GCTM EF+RD+G+ ALI+YDDLSKQAVAYRQ+SLLLRRPPGREAYPGDVFYLHSRLLERA
Sbjct: 242 GCTMAEFYRDKGDHALIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERA 301

Query: 303 SRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMFN 362
           ++V++        GA     GSLTALPIIETQAGDVSA++PTNVISITDGQ++LE  +FN
Sbjct: 302 AKVNDSL------GA-----GSLTALPIIETQAGDVSAYIPTNVISITDGQVYLEPNLFN 350

Query: 363 SGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQL 422
           +GIRPA+N G+SVSRVGGAAQ K +K+++G +R  LAQYRELAAFAQF SDLD+AT+++L
Sbjct: 351 AGIRPAINVGLSVSRVGGAAQIKAMKQVAGTMRLDLAQYRELAAFAQFGSDLDKATKQKL 410

Query: 423 EHGQRVTELMKQKQYAPMSIADMALSLYAAERGFLTDVEIAKVGSFEQALIAYFNRDHAD 482
           + G R+ EL+KQ QY PM +     S+YAA RG + DV +  +  FE  ++ +     AD
Sbjct: 411 DRGARLVELLKQPQYQPMPVEQQVASMYAATRGLMDDVPVLAIRKFEAEMLDFLKNSKAD 470

Query: 483 LLAKINVKGDFNDEIDAGMKAGIEKFK 509
           +L  I  K   + +I+  +KA + +FK
Sbjct: 471 ILNDIKTKKALDADIEDRLKAAVAEFK 497