Pairwise Alignments

Query, 172 a.a., DNA-3-methyladenine glycosylase (EC 3.2.2.20) from Pseudomonas fluorescens FW300-N2E2

Subject, 191 a.a., DNA-3-methyladenine glycosidase I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  187 bits (475), Expect = 9e-53
 Identities = 93/173 (53%), Positives = 116/173 (67%), Gaps = 4/173 (2%)

Query: 3   YHDQEWGTPLRDAQGLFELLLLEGFQAGLSWITVLRKRERYREVLYGFDVQRVAQMSDAE 62
           YHD  WG P+ D + LF  L L+G QAGLSWIT+L+K++ Y +    F+   +A   DA+
Sbjct: 18  YHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYEQAFADFEPAVIATFDDAK 77

Query: 63  IDELMLDPGIIRNRLKLKAARRNAQAWLAL----EDPVAFLWSFVGDKPIINHFKDRSEV 118
           ++ELM +PGI+RNRLK+ +  RNA+ +LA     ED  AFLWSFVG KP +N F   S++
Sbjct: 78  VEELMANPGIVRNRLKIHSIIRNAKGYLAYTADGEDFSAFLWSFVGGKPRVNQFTSMSQI 137

Query: 119 PAITPEALAMSKGLKKAGFTFVGPTICYALMQASGMVMDHTQDCDRYAELANG 171
           PA TPE+ AMSK LKK GF FVGPTICYA MQA GMV DH  DC  Y     G
Sbjct: 138 PAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHLVDCVAYDACCGG 190