Pairwise Alignments

Query, 312 a.a., ABC-type transport system involved in resistance to organic solvents, periplasmic component USSDB6C from Pseudomonas fluorescens FW300-N2E2

Subject, 306 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  152 bits (384), Expect = 1e-41
 Identities = 91/309 (29%), Positives = 159/309 (51%), Gaps = 16/309 (5%)

Query: 1   METRAHHVLIGLFTVIVVAGALLFGLWLAKSSVDSEFKDYEVVFNEAVSGLSRGSSVEYS 60
           METRA ++L+G+FT++ V GAL F LW A          Y+V F+  V GLS  S V ++
Sbjct: 1   METRASYILVGVFTLLAVTGALAFVLWTAGRGEGKAMAAYDVHFSGNVMGLSVASDVFFN 60

Query: 61  GIKVGDVVNLRLDPNDPRRVLARVRLSGETPIKQDTQAKLALTGITGTSIIQLSGGTPQS 120
           G+KVG V  + L+P+DP +V  R+ +   TP+++D+ A L   G+TG S++Q++GG+P +
Sbjct: 61  GVKVGAVKQITLNPDDPAKVKVRIEIDATTPVREDSVASLEGRGLTGVSVVQITGGSPHA 120

Query: 121 PALTGHDGEPPVIIAAPSPIARLLNNSDDLMTSINLLLHNANEVFSSDNVQSLGKTLEHL 180
           P L G  GE PVI +  S +  L      L+ S N L++   +V +++N  +L  T   L
Sbjct: 121 PLLVGTAGEVPVIASRASRLEELFAGMPQLVGSGNELVNRLADVLNAENRAALASTFHAL 180

Query: 181 EQTTGVIAEQRGDIRQAMQQLASIGKQASATLEQTTALMRNANG----LLNDQGKQAFGS 236
           +  T  +A +   + + +             ++ TT  + NA+     L  D      G 
Sbjct: 181 DTVTARMAARADSLDRII-----------TNMDTTTRRLANASAGLETLAGDMRDLTRGD 229

Query: 237 AGQAMQSLARSTATLDKLLNDNRDSLNN-GMQGLNALAPAVRELRETLSALRGISRRLDA 295
              ++ ++  +   LD LL      +     +GL  +   + E R  ++ L  +++R+++
Sbjct: 230 MRDSIVAVGNTARRLDALLAAAEPGVTGFSTEGLEDMRRLLIESRHLVTTLNRMAQRMES 289

Query: 296 NPSGYLLGN 304
           +P  ++ GN
Sbjct: 290 DPRRFMFGN 298