Pairwise Alignments

Query, 382 a.a., ABC-type transport system involved in resistance to organic solvents, permease component USSDB6A from Pseudomonas fluorescens FW300-N2E2

Subject, 261 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  127 bits (318), Expect = 5e-34
 Identities = 81/258 (31%), Positives = 140/258 (54%), Gaps = 9/258 (3%)

Query: 115 VSVLTQLLTRIGRAVEKVWQDTLQLLGFVGLILETLARNLFRPRRWRMTPMVV-HIEQTG 173
           +SV+ Q+  R+GR       D++  LG  GL+L      +  PR  + TP+++  +   G
Sbjct: 1   MSVIDQI-ARLGRGAI----DSVTGLGRAGLMLWGAIAKI--PRVRKGTPLLIKQLYVIG 53

Query: 174 LDAAPIVALLTFLVGAVVAFLGATVLADFGASIFTVDLVAFSFLREFGVLLTAILMAGRT 233
           + +  I+ +    +G V+A  G  +L  FG       +VA S LRE G ++TA+L AGR 
Sbjct: 54  VQSMVIILVSGLFIGMVLALQGYNILVGFGTEDSLGPMVALSLLRELGPVVTALLFAGRA 113

Query: 234 ASAFTAQIGSMKANEEIDAIRTLGLDPVELLVIPRVLALLVALPMLTFLAMLSGIIGGGV 293
            SA TA+IG MK+ E++ ++  + +DP+  ++ PR  A +++LP+L  +    GI GG +
Sbjct: 114 GSALTAEIGLMKSTEQLSSLEMMAIDPLRQVIAPRFWAGVISLPLLALMFTAVGIYGGHL 173

Query: 294 VCALSLGISPAMFLTLLQSDIGVQHFLVG-MVKAPIFAFLIAAVGCLEGFKVSGSAESVG 352
           V     GI    F ++LQ+ +  +  +V  ++K+ +FA ++  +    G+ V  + E + 
Sbjct: 174 VGVEWKGIDSGSFWSILQASVEWRQDIVNCLIKSLVFAVVVTWIALYRGYHVIPNPEGIS 233

Query: 353 AHTTSSVVQSIFVVIVLD 370
             TT +VVQS   V+ LD
Sbjct: 234 RATTQTVVQSSLAVLALD 251