Pairwise Alignments

Query, 436 a.a., Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 427 a.a., sun protein (RefSeq) from Shewanella loihica PV-4

 Score =  354 bits (909), Expect = e-102
 Identities = 203/430 (47%), Positives = 259/430 (60%), Gaps = 7/430 (1%)

Query: 2   NPRLAAAKALAAVLSGKASLNSSLPTQLDKVED-RDRGFTQDLAFGTARWQPRLSALAAK 60
           N R  AA+ +  VL    SL+ +LP Q  ++   +D+    +L +G  R  P+L  L + 
Sbjct: 3   NLRALAARVVFQVLEKGVSLSVALPEQQQRLTSGKDKALLAELCYGVMRHLPQLDKLVSD 62

Query: 61  LLQKPFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVGCADKLKKPWAKALLNAVLRR 120
            + KP K     V  LLLVG YQL +TR+P HAAI ET     +LK      ++N VLR 
Sbjct: 63  CMSKPLKGKQRIVHQLLLVGCYQLYFTRIPGHAAISETAEACRQLKFEGLVKVVNGVLRN 122

Query: 121 AQRESEALLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHH 180
            QR  + L    E +  +    P WL K LKA +P+ W+ + A ++  PPM LR N+   
Sbjct: 123 LQRNQKPLP---EDNETLAFNTPAWLIKRLKAAYPDSWQEMIAQSHQRPPMWLRNNQLSQ 179

Query: 181 TRDAYLALLGEAGIPAIPCQYSRDGIVLETPGDVRALPGFAEGWISVQDEAAQLAADLLE 240
           TR+ YL LL E  I A P   S D I+LE+P DV  LPGFA+G  SVQD AAQ AA LL 
Sbjct: 180 TREQYLTLLDEQEIAATPGA-SNDAILLESPKDVGMLPGFADGVASVQDGAAQWAASLLA 238

Query: 241 LAPGQRVLDACCAPGGKTCHILEVEPKLAGVVAVDLEAKRLVRVKENLERLGLEAELIAA 300
               + +LDAC APGGK+CH+LE +P +  +VAVD +AKRL RV++NL+RL L+A+L+  
Sbjct: 239 PEANELILDACAAPGGKSCHLLESQPSI-DLVAVDFDAKRLERVQQNLDRLSLKAKLVHG 297

Query: 301 DGRDTATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDALWL 360
           D     +WW G  F RILLDAPCSATGVIRRHPDIK  R+  DI  LA LQ ++LD  W 
Sbjct: 298 DAAKIDSWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKQADIEELATLQSQILDHCWQ 357

Query: 361 TLEVGGMLLYATCSTLPTENTEVIEAFLARTPGARELDIASQAGLKQPHGRQLLAQEGGH 420
            L+ GG LLYATCS LP EN E I AFLART  A  + IA Q       G Q+   +   
Sbjct: 358 WLKPGGTLLYATCSILPQENAEQIAAFLARTQDATLIPIAQQQN-SDDIGWQITPGQDNM 416

Query: 421 DGFYYAKLIK 430
           DGFYYA+L+K
Sbjct: 417 DGFYYARLVK 426