Pairwise Alignments

Query, 436 a.a., Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 404 a.a., sun protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  135 bits (341), Expect = 2e-36
 Identities = 96/308 (31%), Positives = 137/308 (44%), Gaps = 17/308 (5%)

Query: 127 ALLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHHTRDAYL 186
           A + + + +PV+    P WL    +      WE   AA N  P   LRVN    +RD  +
Sbjct: 109 ARIEQAKTNPVLWDGCPEWLDTMGREQLGASWEKERAALNRPPKRFLRVNGLKVSRDELV 168

Query: 187 ALLGEAGIPAIPCQYSRDGIVLETPGDVRALPGFAEGWISVQDEAAQLAADLLELAPGQR 246
             L    +           + + +   +     F EG    QD  +Q  A  L+  PG R
Sbjct: 169 QKLATEFVSTQVVDSVDSALEVTSDSALFRTNSFKEGLFEQQDAGSQRVAAALDAKPGMR 228

Query: 247 VLDACCAPGGKTCHILEVEPKLAGVVAVDLEAKRLVRVKENLERLG---LEAELIAADGR 303
           V+DAC   GGKT HI         ++A+D+E  +L  +KE   R G   +E  LI     
Sbjct: 229 VIDACAGAGGKTLHIAAQMQGKGRLLAMDVEQWKLDNLKERARRNGAHNIETRLIVGSKT 288

Query: 304 DTATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDALWLTLE 363
                       R+LLD PCS  GV++R+PD K     D +  L  LQ  +L +    ++
Sbjct: 289 IKRLKLTA---DRVLLDVPCSGLGVLKRNPDAKWRDTADRLPVLMELQKHILSSYSRMVK 345

Query: 364 VGGMLLYATCSTLPTENTEVIEAFLARTPGARELDIASQAGLKQPHGRQLLAQEGGHDGF 423
           VGG+++YATCS  P EN   ++AFLA  P  R L+              +   + G DGF
Sbjct: 346 VGGIVVYATCSIFPCENRGQVDAFLAENPNFRLLE-----------DETISPADTGFDGF 394

Query: 424 YYAKLIKI 431
           Y AKL +I
Sbjct: 395 YLAKLERI 402