Pairwise Alignments

Query, 436 a.a., Ribosomal RNA small subunit methyltransferase B (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

Subject, 428 a.a., sun protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  345 bits (884), Expect = 2e-99
 Identities = 202/431 (46%), Positives = 257/431 (59%), Gaps = 7/431 (1%)

Query: 1   MNPRLAAAKALAAVLSGKASLNSSLPTQLDKVED-RDRGFTQDLAFGTARWQPRLSALAA 59
           MN R  AAKA+  VL    SL+ +LP Q   +   +D+    +L +G  R  P++    A
Sbjct: 1   MNLRALAAKAIFDVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRTA 60

Query: 60  KLLQKPFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVGCADKLKKPWAKALLNAVLR 119
           + L KP K     +  LL+VG YQL +TR+P+HAAI ET     +LK      ++N VLR
Sbjct: 61  ECLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLR 120

Query: 120 RAQRESEALLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRH 179
             QR+   L  E E    +    P WL K LK  +P  W+ I   ++  PPM LR NR  
Sbjct: 121 NIQRQLTPLSNESE---TLSYNTPGWLIKRLKTAYPGNWQEIIQQSHERPPMWLRNNRLS 177

Query: 180 HTRDAYLALLGEAGIPAIPCQYSRDGIVLETPGDVRALPGFAEGWISVQDEAAQLAADLL 239
            +RD YLA L +  I A     S D I+L  P DV  LP F EG  SVQD AAQ AA LL
Sbjct: 178 QSRDEYLAALDKLEIDA-SAGLSDDAILLAAPKDVATLPLFLEGAASVQDGAAQWAATLL 236

Query: 240 ELAPGQRVLDACCAPGGKTCHILEVEPKLAGVVAVDLEAKRLVRVKENLERLGLEAELIA 299
                + +LDAC APGGK+CH+LE+EP +  ++AVD +AKRL RV++NL+RL L+AE+I 
Sbjct: 237 APQANELILDACAAPGGKSCHLLELEPSIK-LIAVDFDAKRLERVQQNLDRLSLKAEVIH 295

Query: 300 ADGRDTATWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDALW 359
            D  +  +WW G+ F RILLDAPCSATGVIRRHPDIK  R+  DI  LA LQ ++LD  W
Sbjct: 296 GDAANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCW 355

Query: 360 LTLEVGGMLLYATCSTLPTENTEVIEAFLARTPGARELDIASQAGLKQPHGRQLLAQEGG 419
             L+ GG LLYATCS LP EN + I AFLART  A+ LD   Q    Q  G Q+   +  
Sbjct: 356 KWLKPGGTLLYATCSILPQENRDQISAFLARTADAK-LDTLVQQASSQDIGWQITPGQHN 414

Query: 420 HDGFYYAKLIK 430
            DGFYYA+L+K
Sbjct: 415 MDGFYYARLLK 425