Pairwise Alignments

Query, 530 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 841 a.a., cytochrome c oxidase, subunit I from Pseudomonas stutzeri RCH2

 Score =  429 bits (1103), Expect = e-124
 Identities = 221/527 (41%), Positives = 314/527 (59%), Gaps = 7/527 (1%)

Query: 7   DHGHAGADHAHGPAKGLMRWVLTTNHKDIGTLYLWFAFSMFLLGGSFAMVIRAELFQPGL 66
           D  H   D   G  +G  R +   NH  IG  +L      FL+GG  AM+IR +L  PG 
Sbjct: 14  DQLHDQFDEVWGNPRG-WRALTIVNHTSIGLRFLVTGAFFFLVGGLLAMLIRTQLALPGY 72

Query: 67  QIVQPEFFNQMTTMHGLVMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPA 126
           ++++P+ +NQ+ TMHG VM+F   +P   GLA ++IP MIGA D+  PR++   ++    
Sbjct: 73  ELMEPDVYNQVFTMHGTVMMFLFAVPMMEGLAVYLIPKMIGARDLVFPRLSALGYYCYLF 132

Query: 127 AFLMLVSTLFTPGGGPNFGWTFYAPLSTTYAPESVT--FFIFAIHLMGISSIMGAINVIA 184
             L+L+S++F     P  GW  Y PLS++     V   F++  I  + IS++   + ++ 
Sbjct: 133 GGLILLSSIFLDVA-PKAGWFMYTPLSSSAHTPGVNSDFWLLGITFVEISAVSAGVELVV 191

Query: 185 TILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGCVTMMLMDIHFGTSFFSAAGGG 244
           +IL  R  GM L KMPL+ W  L+ A +++   P L     ++ ++   G  FF  A GG
Sbjct: 192 SILRTRTNGMALHKMPLYAWYILVMAMMIVVGFPPLILGSILLELERAAGMPFFDVARGG 251

Query: 245 DPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATAAIAFLSFIV 304
           DPVL+QH+FW FGHPEVYI+ LP  G VS++IP F ++PL GY  +V       F+SF +
Sbjct: 252 DPVLWQHLFWLFGHPEVYIIFLPGAGIVSTLIPVFCQRPLVGYRWVVLGVLTTGFISFGL 311

Query: 305 WAHHMFVVGIPLVGELFFMYATLLIAVPTGVKVFNWASTMWQGSLTFETPMLFAVAFVIL 364
           W HHMF VGIP +   FF  A++L+A+PTGV++F W +T+W G   +  PML+ V F+I+
Sbjct: 312 WVHHMFTVGIPQLATAFFSAASMLVAIPTGVQIFAWLATLWLGKPVYRVPMLWLVGFLIV 371

Query: 365 FSIGGFSGLMLAIAPADFQYQDTYFVVAHFHYVLVPGAIFGIFASAYYWLPKWTGHMYDE 424
           F  GG +G+MLA+ P D+Q  DT+FVVAH HYVLV G +F + A  YYWLP ++G M  E
Sbjct: 372 FVAGGLTGVMLALVPFDWQVHDTHFVVAHMHYVLVGGMVFPLMAGLYYWLPHFSGRMPSE 431

Query: 425 TLGKLHFWLSFIGMNLAFFPMHFVGLAGMPRRIPDYN--LQFADFNMVSSIGAFMFGTTQ 482
            LG+  FWL FIG N+ F  MH+ GL GMPRR+  Y+  L +   N+VSSIG+F+     
Sbjct: 432 KLGRWGFWLFFIGFNVTFLIMHWTGLIGMPRRVYTYDTGLGWDMPNLVSSIGSFIMAAGV 491

Query: 483 IFFLFIVIKTIRGGEPAPAKPWDGAEGLEWSVPSPAPYHTFTTPPEV 529
              L  +I   R G PAP  PW  A+ LEW+   P   + F + P+V
Sbjct: 492 ATILLDIILHFRFGIPAPKNPWK-ADTLEWATSLPPSAYNFVSLPDV 537