Pairwise Alignments

Query, 530 a.a., Cytochrome c oxidase polypeptide I (EC 1.9.3.1) from Pseudomonas fluorescens FW300-N2E2

Subject, 562 a.a., cytochrome C oxidase polypeptide I transmembrane protein from Sinorhizobium meliloti 1021

 Score =  613 bits (1582), Expect = e-180
 Identities = 300/549 (54%), Positives = 379/549 (69%), Gaps = 27/549 (4%)

Query: 7   DHGHAGADHAHGPAKGLMRWVLTTNHKDIGTLYLWFAFSMFLLGGSFAMVIRAELFQPGL 66
           DHGHA  DHAH P     RW L+TNHKDIGTLYL FA    ++GG+ ++ +RAEL +PG+
Sbjct: 16  DHGHA--DHAHKPLTFFQRWFLSTNHKDIGTLYLIFAIIAGIIGGTLSVFMRAELQEPGI 73

Query: 67  QIVQ------------------PEFFNQMTTMHGLVMVFGAVMPAFVG-LANWMIPLMIG 107
           QI                       FN  TT H L+M+F  VMPA +G  ANWM+P+MIG
Sbjct: 74  QIFHGLAQMVYGFEGDAAIDGGKHMFNVFTTAHALIMIFFMVMPALIGGFANWMVPIMIG 133

Query: 108 APDMALPRMNNFSFWLLPAAFLMLVSTLFTPGG----GPNFGWTFYAPLSTTYAP-ESVT 162
           APDMA PRMNN SFWL+  AFL+++ ++F  G     G   GWT Y P ST+  P  ++ 
Sbjct: 134 APDMAFPRMNNISFWLIVPAFLLVLLSMFVEGPAGAYGAGGGWTIYPPFSTSGMPGPAMD 193

Query: 163 FFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAG 222
             I  +H+ G SSI+GAIN I TILN+RAPGMTL KMPLF W+ LITAFLL+  +PVLAG
Sbjct: 194 LAILGLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFAWSVLITAFLLLLSLPVLAG 253

Query: 223 CVTMMLMDIHFGTSFFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRK 282
            +TM+L D +FGT+FF+  GGGDP+LFQH+FWFFGHPEVYI+ILP FG VS II  FSRK
Sbjct: 254 AITMLLTDRNFGTTFFAPEGGGDPILFQHLFWFFGHPEVYILILPGFGIVSHIISTFSRK 313

Query: 283 PLFGYTSMVYATAAIAFLSFIVWAHHMFVVGIPLVGELFFMYATLLIAVPTGVKVFNWAS 342
           P+FGY  M YA  AI  + FIVWAHHM+ VG+ L  + +F++AT++IAVPTGVK+F+W +
Sbjct: 314 PIFGYLGMAYAMVAIGAVGFIVWAHHMYTVGMSLQTQRYFVFATMVIAVPTGVKIFSWIA 373

Query: 343 TMWQGSLTFETPMLFAVAFVILFSIGGFSGLMLAIAPADFQYQDTYFVVAHFHYVLVPGA 402
           TMW GS+ F TPM++A+ F+ LF++GG +G+ LA A  D    DTY+VVAHFHYVL  GA
Sbjct: 374 TMWGGSIRFATPMVWAIGFIFLFTVGGVTGVQLANAGLDRALHDTYYVVAHFHYVLSLGA 433

Query: 403 IFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFIGMNLAFFPMHFVGLAGMPRRIPDYNL 462
           +F IFA+ YYW PK TG+MY E LGKLHFW+ F+G+NL FFP HF+GLAGMPRR  DY  
Sbjct: 434 VFAIFAAWYYWFPKMTGYMYSEFLGKLHFWVMFVGVNLIFFPQHFLGLAGMPRRYIDYPD 493

Query: 463 QFADFNMVSSIGAFMFGTTQIFFLFIVIKTIRGGEPAPAKPW-DGAEGLEWSVPSPAPYH 521
            FA +NMVSS G+++     + FLF V +       A   PW +GA  LEW + SP P+H
Sbjct: 494 AFAGWNMVSSYGSYIAAVGVLIFLFCVAEAFAKKRVAGDNPWGEGANTLEWQLSSPPPFH 553

Query: 522 TFTTPPEVK 530
            +   P +K
Sbjct: 554 QWEQLPRIK 562