Pairwise Alignments

Query, 305 a.a., Transcriptional regulator from Pseudomonas fluorescens FW300-N2E2

Subject, 293 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 76.6 bits (187), Expect = 6e-19
 Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 23/270 (8%)

Query: 1   MNLESKWLEDFSALAATRSFSQAAERRFVTQPAFSRRIRSLEAALGLTLVNRSRTPVELT 60
           MN+  K L+ F  L  T +F++AA++ F+TQP  S+ I+ LE +LG TL+ R+   VELT
Sbjct: 1   MNIPIKTLQCFLTLVETENFTRAAQKCFITQPTLSKIIQRLEESLGETLLIRNNQKVELT 60

Query: 61  AAGQLFLVTARTVVEQ---LGEVLRHLHHLEGGQGEVIQVAAAHSLALGFFPRWIAQLRN 117
            AGQLF  +AR ++ Q   L E + +L  L+ G+  +       SL +G    +  + R 
Sbjct: 61  QAGQLFEHSAREILGQWHRLQEDMSNLSGLKSGRLRLGVCPMMSSLIIGLLTSY--RKRY 118

Query: 118 EGMNIATRLVATNVGDAVHALREGGCDLMLAFYDPDSAMQMDPEIFPSLHLGQ-TEMLPV 176
            G+ +            ++     GC+  L     D A    P    +  + Q     P+
Sbjct: 119 PGVEL-----------QMYEYGGFGCEQALLNNSLDIAFTALPTTHETELINQPLTKYPL 167

Query: 177 CAAGADGKPL-----FDLEGEASVPLLAYSAGAFLGRSVNQLLRQRALRFTTIYETAMAD 231
            A   +  PL        +     P + Y+    L + +N+L R+  ++    + +   D
Sbjct: 168 LACLPEAHPLAAKSYLSWQDFEPYPFILYNEDFSLAKLINRLSRKAGVQLNIAFRSGQWD 227

Query: 232 SLKSMALEGLGIAWVPHLSVRAELARGELV 261
            L +M    +G+A +P   +  +L+  +LV
Sbjct: 228 FLATMVEADMGLAILPE-PICQKLSNSKLV 256