Pairwise Alignments

Query, 406 a.a., L-carnitine dehydratase/bile acid-inducible protein F from Pseudomonas fluorescens FW300-N2E2

Subject, 389 a.a., acyl-CoA transferase/carnitine dehydratase (RefSeq) from Shewanella amazonensis SB2B

 Score =  427 bits (1098), Expect = e-124
 Identities = 222/390 (56%), Positives = 273/390 (70%), Gaps = 6/390 (1%)

Query: 4   LSHLRVLDLSRVLAGPWAGQILADLGADVIKVERPGNGDDTRAWGPPFLKDARGENTTEA 63
           L  LRVLDLSRVLAGPW  Q+LAD+GA+VIK+E P  GDDTR WGPP+   A G    +A
Sbjct: 5   LKGLRVLDLSRVLAGPWCSQLLADMGAEVIKIEHPDGGDDTRHWGPPY---AGGHTQGDA 61

Query: 64  AYYLSANRNKQSVTIDFTRPEGQRLVRELAAKSDILIENFKVGGLAAYGLDYESLKAINP 123
           AY+L+ANR K+S+ +D   P     +++LA  SDIL+ENFKVGGLA YGLDY SLKA+NP
Sbjct: 62  AYFLAANRGKKSLLLDLKNPHDVAQIQKLARHSDILLENFKVGGLAKYGLDYGSLKAMNP 121

Query: 124 QLIYCSITGFGQTGPYAKRAGYDFMIQGLGGLMSLTGRPEGDEGAGPVKVGVALTDILTG 183
           QL+YCSITGFGQ+GP A RAGYDFMIQ +GGLMSLTG    D+G  P+K GVA+TD+ TG
Sbjct: 122 QLVYCSITGFGQSGPDAPRAGYDFMIQAMGGLMSLTGA--ADDGGEPMKTGVAITDLFTG 179

Query: 184 LYSTAAILAALAHRDHAGGGQHIDMALLDVQVACLANQAMNYLTTGHAPKRLGNAHPNIV 243
           LY+  AILAA+  R   G G HIDMAL DVQ+A LANQA N+L +G  P RLGNAHPNIV
Sbjct: 180 LYAANAILAAIVARQSTGLGCHIDMALFDVQLAMLANQAQNFLASGQNPPRLGNAHPNIV 239

Query: 244 PYQDFPTADGDFILTVGNDGQFRKFAEVAGQPQWADDSRFATNKLRVANRAVLIPLIRQA 303
           PYQ F  ADG  IL VGNDGQF +F E+AG  +   DSRFATN  RV +R  L+PLI+ A
Sbjct: 240 PYQAFACADGHLILAVGNDGQFARFCELAGLHELPHDSRFATNAGRVRHRETLLPLIKAA 299

Query: 304 TVFKTTAEWVAQLEQAGVPCGPINDLAQVFADPQVQARGLAMELPHVLAGSVPQVASPIR 363
            + K+  EW+A L  AGVP GPIN +++   +PQ Q R + +E        +P V SP++
Sbjct: 300 MLTKSKGEWLALLNDAGVPAGPINTVSEALDEPQAQHRQMQIE-RDFNGERLPFVGSPVK 358

Query: 364 LSETPVEYRNAPPLLGEHTLEVLQRVLGLD 393
           +    +     PP LGEH  E+L  + GL+
Sbjct: 359 MDGEALNSPLPPPRLGEHQQELLAWLDGLE 388